SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_152744 |
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Gene Symbol: | SDK1 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.3530452A>T | COSN6879868 | RK122_C01 | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-5692a | tgTTATTTacctgtg | CAAAUAAU | m6b | Created | HHFCT_145476_cluster-20630_27_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.3508685C>A | COSN2220980 | RK080_C01 | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-15b-3p | acctttcATGATTCt | CGAAUCAU | m7b | Created | HHFKP_133819_cluster-20630_20_18 |
hsa-miR-488-3p | aCCTTTCAtgattct | UUGAAAGG | m7b | Created | HHFKP_133819_cluster-20630_20_18 |
hsa-miR-7154-5p | acctTTCATGAttct | UUCAUGAA | m7b | Created | HHFKP_133819_cluster-20630_20_18 |
hsa-miR-8060 | acctTTCATGattct | CCAUGAAG | m6b | Created | HHFKP_133819_cluster-20630_20_18 |
hsa-miR-873-5p | acctTTCCTGattct | GCAGGAAC | m6b | Disrupted | HHFKP_133819_cluster-20630_20_18 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.3498986G>T | COSN14965837 | LP6005409-DNA_G03 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-126-5p | ttggTAATAATttgc | CAUUAUUA | m7b | Created | HPRT3_23123_G30862.1_3538622 |
hsa-miR-556-3p | ttGGTAATAatttgc | AUAUUACC | m7b | (m6b->m7b) | HPRT3_23123_G30862.1_3538622 |
hsa-miR-944 | ttggtAATAATTTgc | AAAUUAUU | m8a | Created | HPRT3_23123_G30862.1_3538622 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.3474640C>A | COSN6879681 | RK212_C01 | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-219a-1-3p | ctttcCAACTCTaat | AGAGUUGA | m7a | Created | HHFCT_145464_cluster-20630_15_9 |
hsa-miR-3978 | CTTTCCACctctaat | GUGGAAAG | m8a | Disrupted | HHFCT_145464_cluster-20630_15_9 |
hsa-miR-571 | ctttCCAACTCtaat | UGAGUUGG | m7b | Created | HHFCT_145464_cluster-20630_15_9 |
hsa-miR-6134 | ctttCCACCTCtaat | UGAGGUGG | m7b | Disrupted | HHFCT_145464_cluster-20630_15_9 |
hsa-miR-877-5p | ctttccaCCTCTAat | GUAGAGGA | m6b | Disrupted | HHFCT_145464_cluster-20630_15_9 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.3457325G>T | COSN9986548 | AOCS-139-12-5 | [ovary][NS][other][neoplasm] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3125 | ttagttTTCCTCTtt | UAGAGGAA | m7b | Created | HHFCT_145461_cluster-20630_12_9 |
hsa-miR-3916 | ttagttTTCCTCTTt | AAGAGGAA | m8a | Created | HHFCT_145461_cluster-20630_12_9 |
hsa-miR-4470 | ttaGTTTGCCtcttt | UGGCAAAC | m7b | Disrupted | HHFCT_145461_cluster-20630_12_9 |
hsa-miR-6859-5p | ttagttTTCCTCTtt | GAGAGGAA | m7b | Created | HHFCT_145461_cluster-20630_12_9 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.3437385T>A | COSN6879552 | RK308_C01 | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4504 | aTGTCACAaatgttt | UGUGACAA | m7a | Created | HHFCT_145459_cluster-20630_10_14 |
hsa-miR-6808-3p | atGTCACAaatgttt | GUGUGACC | m6b | Created | HHFCT_145459_cluster-20630_10_14 |
hsa-miR-758-3p | atGTCACAAAtgttt | UUUGUGAC | m8a | Created | HHFCT_145459_cluster-20630_10_14 |
hsa-miR-921 | atgTCACTAatgttt | CUAGUGAG | m6b | Disrupted | HHFCT_145459_cluster-20630_10_14 |
hsa-miR-4504 | aTGTCACAaatgttt | UGUGACAA | m7a | Created | HHFKP_133812_cluster-20630_13_9 |
hsa-miR-6808-3p | atGTCACAaatgttt | GUGUGACC | m6b | Created | HHFKP_133812_cluster-20630_13_9 |
hsa-miR-758-3p | atGTCACAAAtgttt | UUUGUGAC | m8a | Created | HHFKP_133812_cluster-20630_13_9 |
hsa-miR-921 | atgTCACTAatgttt | CUAGUGAG | m6b | Disrupted | HHFKP_133812_cluster-20630_13_9 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr7:g.3337824A>G | COSN5656167 | RK010_C | [liver][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-204-5p | gaAAAGGGAAacttt | UUCCCUUU | m8a | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-211-5p | gaAAAGGGAAacttt | UUCCCUUU | m8a | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-4446-5p | gaaaAGGGAAActtt | AUUUCCCU | m7b | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-4755-5p | gaaAAGGGAAActtt | UUUCCCUU | m8a | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-5006-3p | gaaAAGGGAAActtt | UUUCCCUU | m8a | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-623 | gaaAAGGGAaacttt | AUCCCUUG | m6b | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-6832-3p | gAAAAGGGaaacttt | ACCCUUUU | m7b | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-204-5p | gaAAAGGGAAacttt | UUCCCUUU | m8a | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-211-5p | gaAAAGGGAAacttt | UUCCCUUU | m8a | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-4446-5p | gaaaAGGGAAActtt | AUUUCCCU | m7b | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-4755-5p | gaaAAGGGAAActtt | UUUCCCUU | m8a | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-5006-3p | gaaAAGGGAAActtt | UUUCCCUU | m8a | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-623 | gaaAAGGGAaacttt | AUCCCUUG | m6b | Created | HHFCT_145453_cluster-20630_4_7 |
hsa-miR-6832-3p | gAAAAGGGaaacttt | ACCCUUUU | m7b | Created | HHFCT_145453_cluster-20630_4_7 |