SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_015356
Gene Symbol: SCRIB

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr8:g.143812985C>A COSN216412
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6501-3p atccgcGCTCTGact CCAGAGCA m6b Disrupted HPTA4_3982_G17865.1_144895154
hsa-miR-1288-5p atccgcGATCTGact GCAGAUCA m6b Created HPTA4_3982_G17865.1_144895154
hsa-miR-5100 atccgcGATCTGAct UUCAGAUC m7b Created HPTA4_3982_G17865.1_144895154

Mutation Mutation ID Sample Name Cancer Type
chr8:g.143812977C>G COSN8892581 B104-0-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3166 tctgacTGTCTGCcc CGCAGACA m7b Created HPTA4_3982_G17865.1_144895154
hsa-miR-5702 tCTGACTCtctgccc UGAGUCAG m7b Disrupted HPTA4_3982_G17865.1_144895154
hsa-miR-3166 tctgacTGTCTGCcc CGCAGACA m7b Created HPTA4_3982_G17865.1_144895154
hsa-miR-1324 tctgaCTGTCTGccc CCAGACAG m7b Created HPTA4_3982_G17865.1_144895154
hsa-miR-5702 tCTGACTCtctgccc UGAGUCAG m7b Disrupted HPTA4_3982_G17865.1_144895154
hsa-miR-1324 tctgaCTGTCTGccc CCAGACAG m7b Created HPTA4_3982_G17865.1_144895154

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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