SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000335
Gene Symbol: SCN5A

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.38638603T>A COSN15233022 SM-4AX84 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-629-3p actgGGGAGAAgtta GUUCUCCC m7b Created HPTA4_2741_G12413.1_38680088
hsa-miR-6867-3p actgGGGAGAagtta CUCUCCCU m6b Created HPTA4_2741_G12413.1_38680088
hsa-miR-6802-3p actGGGGTGAAgtta UUCACCCC m8a Disrupted HPTA4_2741_G12413.1_38680088
hsa-miR-6754-3p actggGGTGAAGtta UCUUCACC m7b Disrupted HPTA4_2741_G12413.1_38680088
hsa-miR-412-3p actggGGTGAAGTta ACUUCACC m8a Disrupted HPTA4_2741_G12413.1_38680088
hsa-miR-2355-5p aCTGGGGAgaagtta AUCCCCAG m7b Created HPTA4_2741_G12413.1_38680088

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser