SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001082959 |
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Gene Symbol: | SCARB1 |
Browse Associations |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.124857324G>A | COSN6613760 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1298-3p | tgtggCCAGATactg | CAUCUGGG | m6b | Created | HHFKP_34264_cluster-5839_34_44 |
hsa-miR-3126-3p | tgtgGCCAGATactg | CAUCUGGC | m7b | Created | HHFKP_34264_cluster-5839_34_44 |
hsa-miR-3176 | tgtGGCCAGatactg | ACUGGCCU | m6b | Created | HHFKP_34264_cluster-5839_34_44 |
hsa-miR-3190-5p | tgTGGCCAGAtactg | UCUGGCCA | m8a | Created | HHFKP_34264_cluster-5839_34_44 |
hsa-miR-3713 | tgtggcCGGATACtg | GGUAUCCG | m7b | Disrupted | HHFKP_34264_cluster-5839_34_44 |
hsa-miR-4701-5p | tGTGGCCAgatactg | UUGGCCAC | m7b | Created | HHFKP_34264_cluster-5839_34_44 |
hsa-miR-588 | tGTGGCCAgatactg | UUGGCCAC | m7b | Created | HHFKP_34264_cluster-5839_34_44 |
hsa-miR-6850-3p | tgtGGCCGGatactg | CCCGGCCG | m6b | Disrupted | HHFKP_34264_cluster-5839_34_44 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.124830761A>G | COSN15088405 | LP6005690-DNA_A02 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-5003-3p | attaaGAAAAGTgca | UACUUUUC | m7b | Disrupted | HHFCT_35647_cluster-5839_31_10 |
hsa-miR-627-3p | attaAGAAAAGtgca | UCUUUUCU | m7b | Disrupted | HHFCT_35647_cluster-5839_31_10 |
hsa-miR-6809-3p | attAAGAGAAGtgca | CUUCUCUU | m8a | Created | HHFCT_35647_cluster-5839_31_10 |
hsa-miR-942-5p | attaAGAGAAGtgca | UCUUCUCU | m7b | Created | HHFCT_35647_cluster-5839_31_10 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.124824729T>G | COSN5831753 | SS6003305 | [oesophagus][NS][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-6807-5p | ggggctTGGCTCACa | GUGAGCCA | m8a | Created | HHFCT_35646_cluster-5839_30_8 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.124782781A>G | COSM314999 | S01453 | [lung][NS][carcinoma][small_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-2681-5p | tagtaGTAAAAaggg | GUUUUACC | m6b | Disrupted | HPSLC_5195_G6160.1_125267339 |
hsa-miR-4999-3p | taGTAGTGAaaaggg | UCACUACC | m7a | (m6a->m7a) | HPSLC_5195_G6160.1_125267339 |
hsa-miR-5096 | tagtaGTGAAAaggg | GUUUCACC | m6b | Created | HPSLC_5195_G6160.1_125267339 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.124782776G>A | COSM4527039 | CSCC-44-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1225-3p | gtaaaaaGGGCTCAa | UGAGCCCC | m7a | Disrupted | HHFKP_34248_cluster-5839_17_16 |
hsa-miR-1233-3p | gtaaaaAGGGCTCAa | UGAGCCCU | m8a | Disrupted | HHFKP_34248_cluster-5839_17_16 |
hsa-miR-129-1-3p | gtaaaAAGGGCTcaa | AAGCCCUU | m7b | Disrupted | HHFKP_34248_cluster-5839_17_16 |
hsa-miR-129-2-3p | gtaaaAAGGGCTcaa | AAGCCCUU | m7b | Disrupted | HHFKP_34248_cluster-5839_17_16 |
hsa-miR-2114-3p | gtaaaaaAGGCTCaa | CGAGCCUC | m6b | Created | HHFKP_34248_cluster-5839_17_16 |
hsa-miR-6823-3p | gtaaaaaAGGCTCAa | UGAGCCUC | m7a | Created | HHFKP_34248_cluster-5839_17_16 |
hsa-miR-6832-3p | gtaAAAAGGGctcaa | ACCCUUUU | m7b | Disrupted | HHFKP_34248_cluster-5839_17_16 |
hsa-miR-1225-3p | gtaaaaaGGGCTCAa | UGAGCCCC | m7a | Disrupted | HPSLC_5195_G6160.1_125267339 |
hsa-miR-1233-3p | gtaaaaAGGGCTCAa | UGAGCCCU | m8a | Disrupted | HPSLC_5195_G6160.1_125267339 |
hsa-miR-129-1-3p | gtaaaAAGGGCTcaa | AAGCCCUU | m7b | Disrupted | HPSLC_5195_G6160.1_125267339 |
hsa-miR-129-2-3p | gtaaaAAGGGCTcaa | AAGCCCUU | m7b | Disrupted | HPSLC_5195_G6160.1_125267339 |
hsa-miR-2114-3p | gtaaaaaAGGCTCaa | CGAGCCUC | m6b | Created | HPSLC_5195_G6160.1_125267339 |
hsa-miR-6823-3p | gtaaaaaAGGCTCAa | UGAGCCUC | m7a | Created | HPSLC_5195_G6160.1_125267339 |
hsa-miR-6832-3p | gtaAAAAGGGctcaa | ACCCUUUU | m7b | Disrupted | HPSLC_5195_G6160.1_125267339 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.124782735C>T | COSM3811415 | TCGA-AO-A03M-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-211-3p | tctgaaTCCCTGatg | GCAGGGAC | m6b | Disrupted | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-4441 | tctgaaTCCCTGatg | ACAGGGAG | m6b | Disrupted | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-6754-5p | tctgaaTCCCTGatg | CCAGGGAG | m6b | Disrupted | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-873-5p | tctgaaTTCCTGatg | GCAGGAAC | m6b | Created | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-211-3p | tctgaaTCCCTGatg | GCAGGGAC | m6b | Disrupted | HHFKP_34248_cluster-5839_17_16 |
hsa-miR-4441 | tctgaaTCCCTGatg | ACAGGGAG | m6b | Disrupted | HHFKP_34248_cluster-5839_17_16 |
hsa-miR-6754-5p | tctgaaTCCCTGatg | CCAGGGAG | m6b | Disrupted | HHFKP_34248_cluster-5839_17_16 |
hsa-miR-873-5p | tctgaaTTCCTGatg | GCAGGAAC | m6b | Created | HHFKP_34248_cluster-5839_17_16 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.124782732T>C | COSM1733028 | ACINAR01 | [pancreas][NS][carcinoma][acinar_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-211-3p | gaaTCCCTGatgaca | GCAGGGAC | m6b | Disrupted | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-4441 | gaaTCCCTGatgaca | ACAGGGAG | m6b | Disrupted | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-4450 | gAATCCCCgatgaca | UGGGGAUU | m7b | Created | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-542-5p | gaATCCCCGAtgaca | UCGGGGAU | m8a | Created | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-6754-5p | gaaTCCCTGatgaca | CCAGGGAG | m6b | Disrupted | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-6777-5p | gaaTCCCCGatgaca | ACGGGGAG | m6b | Created | HHFCT_35630_cluster-5839_13_24 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.124782729T>C | COSM467982 | TCGA-A3-3385-01 | [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.124782709T>C | COSM1359946 | TCGA-D5-6927-01 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1233-3p | caAGGGCTCtgtgct | UGAGCCCU | m7b | (m7b->m6b) | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-3918 | caagGGCCCTGTgct | ACAGGGCC | m8a | Created | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-6851-3p | cAAGGGCCctgtgct | UGGCCCUU | m7b | Created | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-7160-3p | caaGGGCCCTGtgct | CAGGGCCC | m8a | Created | HHFCT_35630_cluster-5839_13_24 |
hsa-miR-1233-3p | caAGGGCTCtgtgct | UGAGCCCU | m7b | (m7b->m6b) | HHFKP_34247_cluster-5839_16_12 |
hsa-miR-3918 | caagGGCCCTGTgct | ACAGGGCC | m8a | Created | HHFKP_34247_cluster-5839_16_12 |
hsa-miR-6851-3p | cAAGGGCCctgtgct | UGGCCCUU | m7b | Created | HHFKP_34247_cluster-5839_16_12 |
hsa-miR-7160-3p | caaGGGCCCTGtgct | CAGGGCCC | m8a | Created | HHFKP_34247_cluster-5839_16_12 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr12:g.124778560A>T | COSM4451831 | CSCC-17-T | [skin][head_neck][carcinoma][squamous_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1972 | gccagccTGGCCTGg | UCAGGCCA | m7b | Created | HHFCT_35626_cluster-5839_9_7 |
hsa-miR-3064-5p | gcCAGCCAGgcctgg | UCUGGCUG | m7b | (m7b->m6b) | HHFCT_35626_cluster-5839_9_7 |
hsa-miR-4650-5p | gccagccAGGCCTGg | UCAGGCCU | m7b | Disrupted | HHFCT_35626_cluster-5839_9_7 |
hsa-miR-4755-3p | gccaGCCTGGCctgg | AGCCAGGC | m7b | Created | HHFCT_35626_cluster-5839_9_7 |
hsa-miR-6504-5p | gcCAGCCAGgcctgg | UCUGGCUG | m7b | (m7b->m6b) | HHFCT_35626_cluster-5839_9_7 |
hsa-miR-1972 | gccagccTGGCCTGg | UCAGGCCA | m7b | Created | HHFKP_34242_cluster-5839_11_23 |
hsa-miR-3064-5p | gcCAGCCAGgcctgg | UCUGGCUG | m7b | (m7b->m6b) | HHFKP_34242_cluster-5839_11_23 |
hsa-miR-4650-5p | gccagccAGGCCTGg | UCAGGCCU | m7b | Disrupted | HHFKP_34242_cluster-5839_11_23 |
hsa-miR-4755-3p | gccaGCCTGGCctgg | AGCCAGGC | m7b | Created | HHFKP_34242_cluster-5839_11_23 |
hsa-miR-6504-5p | gcCAGCCAGgcctgg | UCUGGCUG | m7b | (m7b->m6b) | HHFKP_34242_cluster-5839_11_23 |