SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001145444
Gene Symbol: SCAF4

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr21:g.31671561A>G COSM4653328 SNU-C4 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6799-5p ccgttgaACCTCCCa GGGGAGGU m7b Disrupted HPTA1_7543_G10680.1_33043879
hsa-miR-95-3p CCGTTGAAcctccca UUCAACGG m8a Disrupted HPTA1_7543_G10680.1_33043879
hsa-miR-3689d ccgttgaACCTCCCa GGGAGGUG m7a Disrupted HPTA1_7543_G10680.1_33043879
hsa-miR-2467-5p ccgttGAGCCTCcca UGAGGCUC m7b Created HPTA1_7543_G10680.1_33043879

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser