SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024956
Gene Symbol: SC5D

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.121307238A>G COSM1507098 TCGA-78-7155-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7154-5p tccaTTCATGAcggt UUCAUGAA m7b Disrupted HPKTA_11391_G12240.1_121177935
hsa-miR-8060 tccaTTCATGacggt CCAUGAAG m6b Disrupted HPKTA_11391_G12240.1_121177935

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser