SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0006360
Gene Symbol: RPRD2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.150440954A>C COSM895509 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1276 agaacgaCTCTTTAa UAAAGAGC m7a Created HPCB1_1202_G1528.1_150413418
hsa-miR-4311 agaacgaCTCTTTaa GAAAGAGA m6b Created HPCB1_1202_G1528.1_150413418
hsa-miR-583 agaacgaCTCTTTaa CAAAGAGG m6b Created HPCB1_1202_G1528.1_150413418
hsa-miR-1276 agaacgaCTCTTTAa UAAAGAGC m7a Created HPCB1_1202_G1528.1_150413418
hsa-miR-4311 agaacgaCTCTTTaa GAAAGAGA m6b Created HPCB1_1202_G1528.1_150413418
hsa-miR-583 agaacgaCTCTTTaa CAAAGAGG m6b Created HPCB1_1202_G1528.1_150413418

Mutation Mutation ID Sample Name Cancer Type
chr1:g.150440952G>A COSM263447 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4273 gtAGAACAaatcttt GUGUUCUC m6b Created HPCB1_1202_G1528.1_150413418
hsa-miR-4677-5p gtAGAACAAatcttt UUGUUCUU m7a (m6a->m7a) HPCB1_1202_G1528.1_150413418
hsa-miR-6739-3p gtAGAACAAatcttt AUUGUUCU m7b (m6b->m7b) HPCB1_1202_G1528.1_150413418
hsa-miR-7156-5p gtAGAACAAatcttt UUGUUCUC m7a (m6a->m7a) HPCB1_1202_G1528.1_150413418
hsa-miR-4273 gtAGAACAaatcttt GUGUUCUC m6b Created HPCB1_1202_G1528.1_150413418
hsa-miR-4677-5p gtAGAACAAatcttt UUGUUCUU m7a (m6a->m7a) HPCB1_1202_G1528.1_150413418
hsa-miR-6739-3p gtAGAACAAatcttt AUUGUUCU m7b (m6b->m7b) HPCB1_1202_G1528.1_150413418
hsa-miR-7156-5p gtAGAACAAatcttt UUGUUCUC m7a (m6a->m7a) HPCB1_1202_G1528.1_150413418

Mutation Mutation ID Sample Name Cancer Type
chr1:g.150417622T>G COSM4409912 LP6007422-DNA_A01 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4311 gaaTCTCTTTtacct GAAAGAGA m7b Disrupted HHFKP_12315_cluster-679_4_11
hsa-miR-4311 gaaTCTCTTTtacct GAAAGAGA m7b Disrupted HPRO6_2936_G3399.1_150390107
hsa-miR-4311 gaaTCTCTTTtacct GAAAGAGA m7b Disrupted HHFKP_12315_cluster-679_4_11
hsa-miR-4311 gaaTCTCTTTtacct GAAAGAGA m7b Disrupted HPRO6_2936_G3399.1_150390107

Mutation Mutation ID Sample Name Cancer Type
chr1:g.150417621C>G COSM4845012 TCGA-IR-A3LA-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-10b-3p tGAATCTGTtttacc ACAGAUUC m8a (m7a->m8a) HPRO6_2936_G3399.1_150390107
hsa-miR-4311 tgaaTCTCTTTtacc GAAAGAGA m7b Disrupted HPRO6_2936_G3399.1_150390107
hsa-miR-10b-3p tGAATCTGTtttacc ACAGAUUC m8a (m7a->m8a) HPRO6_2936_G3399.1_150390107
hsa-miR-4311 tgaaTCTCTTTtacc GAAAGAGA m7b Disrupted HPRO6_2936_G3399.1_150390107

Mutation Mutation ID Sample Name Cancer Type
chr1:g.150417618T>C COSM3984192 TCGA-B9-5156-01 [kidney][NS][carcinoma][papillary_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4311 gtttgaaTCTCTTTt GAAAGAGA m7b Disrupted HPRO6_2936_G3399.1_150390107
hsa-miR-583 gtttgaaCCTCTTTt CAAAGAGG m7b Created HPRO6_2936_G3399.1_150390107
hsa-miR-4311 gtttgaaTCTCTTTt GAAAGAGA m7b Disrupted HPRO6_2936_G3399.1_150390107
hsa-miR-583 gtttgaaCCTCTTTt CAAAGAGG m7b Created HPRO6_2936_G3399.1_150390107

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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