SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000987
Gene Symbol: RPL26
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.8383154A>G COSN2482083
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6862-3p agcGGGTGAGGattc CCUCACCC m8a Created HHFKP_58589_uc002glh.1_4_65
hsa-miR-6784-3p agcGGGTGAGgattc UCUCACCC m7b Created HHFKP_58589_uc002glh.1_4_65
hsa-miR-6511a-3p agcgGGTGAGGattc CCUCACCA m7a Created HHFKP_58589_uc002glh.1_4_65
hsa-miR-500a-5p agcgggtAAGGATTc UAAUCCUU m7b Disrupted HHFKP_58589_uc002glh.1_4_65
hsa-miR-6511b-3p agcgGGTGAGGattc CCUCACCA m7a Created HHFKP_58589_uc002glh.1_4_65

Mutation Mutation ID Sample Name Cancer Type
chr17:g.8382162G>A COSM437871 TCGA-A8-A0A7-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7850-5p cccaTCCAAAaggat GUUUGGAC m6b Created HHFKP_58588_uc002glh.1_3_734
hsa-miR-5004-3p cccATCCAAaaggat CUUGGAUU m6b Created HHFKP_58588_uc002glh.1_3_734
hsa-miR-432-3p cCCATCCAaaaggat CUGGAUGG m7b Created HHFKP_58588_uc002glh.1_3_734
hsa-miR-105-3p ccCATCCGaaaggat ACGGAUGU m6b Disrupted HHFKP_58588_uc002glh.1_3_734

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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