SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_016494
Gene Symbol: RNF181
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.85597531C>T COSN8315437 TCGA-C8-A3M7-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2467-3p tggcCCTCTGCgtct AGCAGAGG m7b Disrupted HHKTA_25830_NM_016494|536|575|2.85568410941597|3.79557672131152

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85597171G>A COSM4722062 T3262 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3655 cacaGACAAGataag GCUUGUCG m6b Created HHFCT_89110_uc002spv.1_3_10

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85597148C>T COSM2822677 NCI-H747 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-136-3p ctGATGATGacactt CAUCAUCG m7a (m6a->m7a) HHFCT_89110_uc002spv.1_3_10
hsa-miR-136-3p ctGATGATGacactt CAUCAUCG m7a (m6a->m7a) HPRO6_43449_G51282.1_85824270

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85595825C>T COSM4722061 T3024 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-218-1-3p acgcGAACCAacatg AUGGUUCC m6b Disrupted HHFCT_89108_uc002spv.1_1_19
hsa-miR-4781-3p acgcgaaCCAACATg AAUGUUGG m7b Disrupted HHFCT_89108_uc002spv.1_1_19
hsa-miR-659-3p acgcGAACCAAcatg CUUGGUUC m7b Disrupted HHFCT_89108_uc002spv.1_1_19
hsa-miR-218-1-3p acgcGAACCAacatg AUGGUUCC m6b Disrupted HHFKP_82398_uc002spv.1_1_327
hsa-miR-4781-3p acgcgaaCCAACATg AAUGUUGG m7b Disrupted HHFKP_82398_uc002spv.1_1_327
hsa-miR-659-3p acgcGAACCAAcatg CUUGGUUC m7b Disrupted HHFKP_82398_uc002spv.1_1_327

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85595813AGG>AAA COSM4566984 CSCC-55-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1976 cctgaGCAGGAGacgcg CCUCCUGC m7b Disrupted HHFKP_82398_uc002spv.1_1_327
hsa-miR-3653-5p cctgagCAGGAGacgcg CCUCCUGA m6b Disrupted HHFKP_82398_uc002spv.1_1_327
hsa-miR-370-3p cctgAGCAGGagacgcg GCCUGCUG m6b Disrupted HHFKP_82398_uc002spv.1_1_327
hsa-miR-3934-3p CCTGAGCAggagacgcg UGCUCAGG m8a Disrupted HHFKP_82398_uc002spv.1_1_327
hsa-miR-6885-3p cctgAGCAAAagacgcg CUUUGCUU m6b Created HHFKP_82398_uc002spv.1_1_327
hsa-miR-6893-3p cctgAGCAGGagacgcg CCCUGCUG m6b Disrupted HHFKP_82398_uc002spv.1_1_327
hsa-miR-767-3p ccTGAGCAGgagacgcg UCUGCUCA m7b (m7b->m6b) HHFKP_82398_uc002spv.1_1_327

Mutation Mutation ID Sample Name Cancer Type
chr2:g.85595803G>T COSM3727666 SMYM-PRGP [skin][sole][malignant_melanoma][acral_lentiginous]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1178-5p gccgtcgGACCCTGa CAGGGUCA m7a Disrupted HHFKP_82398_uc002spv.1_1_327
hsa-miR-6841-5p gccgtcGTACCCTga UAGGGUAC m7b Created HHFKP_82398_uc002spv.1_1_327
Mutation Mutation ID Sample Name Cancer Type
chr2:g.85595800T>C COSM4628106 Gp2D [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr2:g.85595785C>T COSM1471361 TCGA-HC-7231-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-124-5p cgaTGAACACGactg CGUGUUCA m8a Disrupted HHFKP_82398_uc002spv.1_1_327
hsa-miR-489-5p cgatgaATACGACtg GGUCGUAU m7b Created HHFKP_82398_uc002spv.1_1_327

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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