SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NR_037962
Gene Symbol: RHOU
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.228745561A>G COSN6025978 RK205_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-140-5p ttaAACCACTaaaat CAGUGGUU m7b Disrupted HPTK1_1781_G2125.1_228881314
hsa-miR-203a-5p ttaAACCACTaaaat AGUGGUUC m7a Disrupted HPTK1_1781_G2125.1_228881314
hsa-miR-203b-5p ttaaACCACTAaaat UAGUGGUC m7a Disrupted HPTK1_1781_G2125.1_228881314
hsa-miR-3591-5p ttaaacCACTAAAat UUUAGUGU m7a Disrupted HPTK1_1781_G2125.1_228881314
hsa-miR-4321 ttaaACCGCTAAaat UUAGCGGU m8a Created HPTK1_1781_G2125.1_228881314
hsa-miR-4460 ttaaACCACTAaaat AUAGUGGU m7b Disrupted HPTK1_1781_G2125.1_228881314
hsa-miR-4727-3p ttaaaCCACTAaaat AUAGUGGG m6b Disrupted HPTK1_1781_G2125.1_228881314
hsa-miR-6718-5p ttaaACCACTAaaat UAGUGGUC m7a Disrupted HPTK1_1781_G2125.1_228881314

Mutation Mutation ID Sample Name Cancer Type
chr1:g.228744771A>G COSN6025977 RK201_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3924 cacagATACATAggt AUAUGUAU m7b Disrupted HPKTA_3441_G3672.1_228880499

Mutation Mutation ID Sample Name Cancer Type
chr1:g.228743763G>T COSN8637622 J30_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3121-3p cagaaagTCTATTTt UAAAUAGA m7b Created HPKMA_812_G959.1_228879519
hsa-miR-3121-3p cagaaagTCTATTTt UAAAUAGA m7b Created HPRO6_4620_G5426.1_228879524

Mutation Mutation ID Sample Name Cancer Type
chr1:g.228743633C>G COSM679215 TCGA-66-2785-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4272 tggcaTTGAATactc CAUUCAAC m6b Created HHKTA_31915_NM_021205|1274|1313|2.33646881679488|0.395890108487402

Mutation Mutation ID Sample Name Cancer Type
chr1:g.228743624G>A COSM1339897 TCGA-AD-6965-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1202 catcgtcGCTGGCAt GUGCCAGC m7b Disrupted HHKTA_31915_NM_021205|1274|1313|2.33646881679488|0.395890108487402
hsa-miR-3194-5p catcgtcGCTGGCat GGCCAGCC m6b Disrupted HHKTA_31915_NM_021205|1274|1313|2.33646881679488|0.395890108487402
hsa-miR-3972 catcgtcGCTGGCAt CUGCCAGC m7b Disrupted HHKTA_31915_NM_021205|1274|1313|2.33646881679488|0.395890108487402
hsa-miR-5190 catcGTCACTGGcat CCAGUGAC m8a Created HHKTA_31915_NM_021205|1274|1313|2.33646881679488|0.395890108487402

Mutation Mutation ID Sample Name Cancer Type
chr1:g.228743620C>T COSM146813 GC8_T [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273c cagccaTTGTCGCtg GGCGACAA m7b Created HHKTA_31915_NM_021205|1274|1313|2.33646881679488|0.395890108487402
Mutation Mutation ID Sample Name Cancer Type
chr1:g.228743567G>A COSM4721598 T2269 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.228743341C>G COSM4721597 T2568 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-214-3p tCCTGCTGTgcttca ACAGCAGG m8a (m7a->m8a) HPRO6_4618_G5424.1_228879084
hsa-miR-2278 tcCTGCTCTgcttca GAGAGCAG m7b (m7b->m6b) HPRO6_4618_G5424.1_228879084
hsa-miR-3619-5p tCCTGCTGtgcttca UCAGCAGG m7b Created HPRO6_4618_G5424.1_228879084
hsa-miR-6501-3p tccTGCTCTGcttca CCAGAGCA m7b Disrupted HPRO6_4618_G5424.1_228879084
hsa-miR-761 tCCTGCTGtgcttca GCAGCAGG m7b Created HPRO6_4618_G5424.1_228879084
hsa-miR-214-3p tCCTGCTGTgcttca ACAGCAGG m8a (m7a->m8a) HPRO8_900_G1208.1_228879084
hsa-miR-2278 tcCTGCTCTgcttca GAGAGCAG m7b (m7b->m6b) HPRO8_900_G1208.1_228879084
hsa-miR-3619-5p tCCTGCTGtgcttca UCAGCAGG m7b Created HPRO8_900_G1208.1_228879084
hsa-miR-6501-3p tccTGCTCTGcttca CCAGAGCA m7b Disrupted HPRO8_900_G1208.1_228879084
hsa-miR-761 tCCTGCTGtgcttca GCAGCAGG m7b Created HPRO8_900_G1208.1_228879084
hsa-miR-214-3p tCCTGCTGTgcttca ACAGCAGG m8a (m7a->m8a) HPRT3_1424_G1904.1_228879084
hsa-miR-2278 tcCTGCTCTgcttca GAGAGCAG m7b (m7b->m6b) HPRT3_1424_G1904.1_228879084
hsa-miR-3619-5p tCCTGCTGtgcttca UCAGCAGG m7b Created HPRT3_1424_G1904.1_228879084
hsa-miR-6501-3p tccTGCTCTGcttca CCAGAGCA m7b Disrupted HPRT3_1424_G1904.1_228879084
hsa-miR-761 tCCTGCTGtgcttca GCAGCAGG m7b Created HPRT3_1424_G1904.1_228879084

Mutation Mutation ID Sample Name Cancer Type
chr1:g.228687567C>T COSN9025253 8051717 [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3940-3p gagCGGGCTGaatgc CAGCCCGG m7a Disrupted HHRBL_1695_BCBL1-2of3-SCL_9776
hsa-miR-4272 gagcggGTTGAATGc CAUUCAAC m8a Created HHRBL_1695_BCBL1-2of3-SCL_9776
hsa-miR-4690-3p gagcGGGCTGaatgc GCAGCCCA m6b Disrupted HHRBL_1695_BCBL1-2of3-SCL_9776
hsa-miR-5685 gagcGGGCTGaatgc ACAGCCCA m6b Disrupted HHRBL_1695_BCBL1-2of3-SCL_9776

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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