SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080496
Gene Symbol: RGP1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.35752998A>G COSN5703299 RK057_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-187-5p ttcagcTGTAGCatt GGCUACAA m6b Created HPCB3_23880_G32782.1_35752996
hsa-miR-221-3p ttcagcTGTAGCatt AGCUACAU m6b Created HPCB3_23880_G32782.1_35752996
hsa-miR-222-3p ttcagcTGTAGCatt AGCUACAU m6b Created HPCB3_23880_G32782.1_35752996
hsa-miR-548v ttcagCTGTAGCatt AGCUACAG m7b Created HPCB3_23880_G32782.1_35752996
hsa-miR-7705 ttcAGCTATagcatt AAUAGCUC m6b Disrupted HPCB3_23880_G32782.1_35752996

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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