SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0035404
Gene Symbol: RFX7
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.56144423G>A COSM4055823 TCGA-BR-4361-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-873-3p gccttctAGTCTCag GGAGACUG m6b Created HHFKP_48086_cluster-7964_25_45
hsa-miR-3672 gccttctAGTCTCAg AUGAGACU m7b Created HHFKP_48086_cluster-7964_25_45
hsa-miR-4786-5p gccttcTGGTCTCAg UGAGACCA m8a Disrupted HHFKP_48086_cluster-7964_25_45
hsa-miR-6864-3p gccttctAGTCTCAg GUGAGACU m7b Created HHFKP_48086_cluster-7964_25_45

Mutation Mutation ID Sample Name Cancer Type
chr15:g.56144416G>A COSM4055822 TCGA-HU-A4H3-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8077 ggtCTCAGCaatgga GGCUGAGU m6b Disrupted HHFKP_48086_cluster-7964_25_45
hsa-miR-4329 gGTCTCAGcaatgga CCUGAGAC m7b Disrupted HHFKP_48086_cluster-7964_25_45
hsa-miR-4663 ggtCTCAGCaatgga AGCUGAGC m6b Disrupted HHFKP_48086_cluster-7964_25_45
hsa-miR-628-5p ggtcTCAGCAatgga AUGCUGAC m6b Disrupted HHFKP_48086_cluster-7964_25_45
hsa-miR-653-5p ggtcTCAACAatgga GUGUUGAA m6b Created HHFKP_48086_cluster-7964_25_45
hsa-miR-7160-5p ggtCTCAGCAatgga UGCUGAGG m7a Disrupted HHFKP_48086_cluster-7964_25_45

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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