SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0056867
Gene Symbol: RBMS1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.160285007C>T COSM1400393 TCGA-AA-3713-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-424-5p acaGCTGCTatacag CAGCAGCA m6b Disrupted HPCB3_13487_G18371.1_161141533
hsa-miR-4524a-5p acaGCTGCTATacag AUAGCAGC m8a Disrupted HPCB3_13487_G18371.1_161141533
hsa-miR-4524b-5p acaGCTGCTATacag AUAGCAGC m8a Disrupted HPCB3_13487_G18371.1_161141533
hsa-miR-497-5p acaGCTGCTatacag CAGCAGCA m6b Disrupted HPCB3_13487_G18371.1_161141533
hsa-miR-568 acagctgTTATACAg AUGUAUAA m7b Created HPCB3_13487_G18371.1_161141533
hsa-miR-646 acAGCTGCTatacag AAGCAGCU m7b (m7b->m6b) HPCB3_13487_G18371.1_161141533
hsa-miR-6838-5p acaGCTGCTatacag AAGCAGCA m6b Disrupted HPCB3_13487_G18371.1_161141533
hsa-miR-424-5p acaGCTGCTatacag CAGCAGCA m6b Disrupted HPKTA_36974_G39769.1_161141530
hsa-miR-4524a-5p acaGCTGCTATacag AUAGCAGC m8a Disrupted HPKTA_36974_G39769.1_161141530
hsa-miR-4524b-5p acaGCTGCTATacag AUAGCAGC m8a Disrupted HPKTA_36974_G39769.1_161141530
hsa-miR-497-5p acaGCTGCTatacag CAGCAGCA m6b Disrupted HPKTA_36974_G39769.1_161141530
hsa-miR-568 acagctgTTATACAg AUGUAUAA m7b Created HPKTA_36974_G39769.1_161141530
hsa-miR-646 acAGCTGCTatacag AAGCAGCU m7b (m7b->m6b) HPKTA_36974_G39769.1_161141530
hsa-miR-6838-5p acaGCTGCTatacag AAGCAGCA m6b Disrupted HPKTA_36974_G39769.1_161141530
hsa-miR-424-5p acaGCTGCTatacag CAGCAGCA m6b Disrupted HPCB3_13487_G18371.1_161141533
hsa-miR-4524a-5p acaGCTGCTATacag AUAGCAGC m8a Disrupted HPCB3_13487_G18371.1_161141533
hsa-miR-4524b-5p acaGCTGCTATacag AUAGCAGC m8a Disrupted HPCB3_13487_G18371.1_161141533
hsa-miR-497-5p acaGCTGCTatacag CAGCAGCA m6b Disrupted HPCB3_13487_G18371.1_161141533
hsa-miR-568 acagctgTTATACAg AUGUAUAA m7b Created HPCB3_13487_G18371.1_161141533
hsa-miR-646 acAGCTGCTatacag AAGCAGCU m7b (m7b->m6b) HPCB3_13487_G18371.1_161141533
hsa-miR-6838-5p acaGCTGCTatacag AAGCAGCA m6b Disrupted HPCB3_13487_G18371.1_161141533
hsa-miR-424-5p acaGCTGCTatacag CAGCAGCA m6b Disrupted HPKTA_36974_G39769.1_161141530
hsa-miR-4524a-5p acaGCTGCTATacag AUAGCAGC m8a Disrupted HPKTA_36974_G39769.1_161141530
hsa-miR-4524b-5p acaGCTGCTATacag AUAGCAGC m8a Disrupted HPKTA_36974_G39769.1_161141530
hsa-miR-497-5p acaGCTGCTatacag CAGCAGCA m6b Disrupted HPKTA_36974_G39769.1_161141530
hsa-miR-568 acagctgTTATACAg AUGUAUAA m7b Created HPKTA_36974_G39769.1_161141530
hsa-miR-646 acAGCTGCTatacag AAGCAGCU m7b (m7b->m6b) HPKTA_36974_G39769.1_161141530
hsa-miR-6838-5p acaGCTGCTatacag AAGCAGCA m6b Disrupted HPKTA_36974_G39769.1_161141530

Mutation Mutation ID Sample Name Cancer Type
chr2:g.160285005A>G COSM3743937 RK070_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-let-7a-2-3p agctgCTGTACAGaa CUGUACAG m8a Created HPCB3_13487_G18371.1_161141533
hsa-let-7c-3p agctgcTGTACAGaa CUGUACAA m7a Created HPCB3_13487_G18371.1_161141533
hsa-let-7g-3p agctgCTGTACAGaa CUGUACAG m8a Created HPCB3_13487_G18371.1_161141533
hsa-miR-214-3p agCTGCTGTacagaa ACAGCAGG m7a (m6a->m7a) HPCB3_13487_G18371.1_161141533
hsa-miR-3120-3p agcTGCTGTacagaa CACAGCAA m6b Created HPCB3_13487_G18371.1_161141533
hsa-miR-4524a-5p aGCTGCTATacagaa AUAGCAGC m8a (m8a->m7a) HPCB3_13487_G18371.1_161141533
hsa-miR-4524b-5p aGCTGCTATacagaa AUAGCAGC m8a (m8a->m7a) HPCB3_13487_G18371.1_161141533
hsa-miR-4742-3p agctgctATACAGAa UCUGUAUU m7a Disrupted HPCB3_13487_G18371.1_161141533
hsa-let-7a-2-3p agctgCTGTACAGaa CUGUACAG m8a Created HPKTA_36974_G39769.1_161141530
hsa-let-7c-3p agctgcTGTACAGaa CUGUACAA m7a Created HPKTA_36974_G39769.1_161141530
hsa-let-7g-3p agctgCTGTACAGaa CUGUACAG m8a Created HPKTA_36974_G39769.1_161141530
hsa-miR-214-3p agCTGCTGTacagaa ACAGCAGG m7a (m6a->m7a) HPKTA_36974_G39769.1_161141530
hsa-miR-3120-3p agcTGCTGTacagaa CACAGCAA m6b Created HPKTA_36974_G39769.1_161141530
hsa-miR-4524a-5p aGCTGCTATacagaa AUAGCAGC m8a (m8a->m7a) HPKTA_36974_G39769.1_161141530
hsa-miR-4524b-5p aGCTGCTATacagaa AUAGCAGC m8a (m8a->m7a) HPKTA_36974_G39769.1_161141530
hsa-miR-4742-3p agctgctATACAGAa UCUGUAUU m7a Disrupted HPKTA_36974_G39769.1_161141530
hsa-let-7a-2-3p agctgCTGTACAGaa CUGUACAG m8a Created HPCB3_13487_G18371.1_161141533
hsa-let-7c-3p agctgcTGTACAGaa CUGUACAA m7a Created HPCB3_13487_G18371.1_161141533
hsa-let-7g-3p agctgCTGTACAGaa CUGUACAG m8a Created HPCB3_13487_G18371.1_161141533
hsa-miR-214-3p agCTGCTGTacagaa ACAGCAGG m7a (m6a->m7a) HPCB3_13487_G18371.1_161141533
hsa-miR-3120-3p agcTGCTGTacagaa CACAGCAA m6b Created HPCB3_13487_G18371.1_161141533
hsa-miR-4524a-5p aGCTGCTATacagaa AUAGCAGC m8a (m8a->m7a) HPCB3_13487_G18371.1_161141533
hsa-miR-4524b-5p aGCTGCTATacagaa AUAGCAGC m8a (m8a->m7a) HPCB3_13487_G18371.1_161141533
hsa-miR-4742-3p agctgctATACAGAa UCUGUAUU m7a Disrupted HPCB3_13487_G18371.1_161141533
hsa-let-7a-2-3p agctgCTGTACAGaa CUGUACAG m8a Created HPKTA_36974_G39769.1_161141530
hsa-let-7c-3p agctgcTGTACAGaa CUGUACAA m7a Created HPKTA_36974_G39769.1_161141530
hsa-let-7g-3p agctgCTGTACAGaa CUGUACAG m8a Created HPKTA_36974_G39769.1_161141530
hsa-miR-214-3p agCTGCTGTacagaa ACAGCAGG m7a (m6a->m7a) HPKTA_36974_G39769.1_161141530
hsa-miR-3120-3p agcTGCTGTacagaa CACAGCAA m6b Created HPKTA_36974_G39769.1_161141530
hsa-miR-4524a-5p aGCTGCTATacagaa AUAGCAGC m8a (m8a->m7a) HPKTA_36974_G39769.1_161141530
hsa-miR-4524b-5p aGCTGCTATacagaa AUAGCAGC m8a (m8a->m7a) HPKTA_36974_G39769.1_161141530
hsa-miR-4742-3p agctgctATACAGAa UCUGUAUU m7a Disrupted HPKTA_36974_G39769.1_161141530

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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