SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0056864
Gene Symbol: RBMS1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.160273970C>A COSN1802012 RK023_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4501 ttttTCACATAatgt UAUGUGAC m7a Disrupted HHFKP_78154_cluster-13957_15_213
hsa-miR-510-3p ttTTTCAAataatgt AUUGAAAC m6b Created HHFKP_78154_cluster-13957_15_213

Mutation Mutation ID Sample Name Cancer Type
chr2:g.160273207A>G COSN14486451 8068563 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29b-2-5p aaagaAAACCAattt CUGGUUUC m6b Disrupted HPRO6_47111_G55855.1_161129721
hsa-miR-3119 aaagAAAGCCAattt UGGCUUUU m7a Created HPRO6_47111_G55855.1_161129721
hsa-miR-3160-5p aaAGAAAGCCaattt GGCUUUCU m8a Created HPRO6_47111_G55855.1_161129721
hsa-miR-29b-2-5p aaagaAAACCAattt CUGGUUUC m6b Disrupted HHFKP_78146_cluster-13957_6_260
hsa-miR-3119 aaagAAAGCCAattt UGGCUUUU m7a Created HHFKP_78146_cluster-13957_6_260
hsa-miR-3160-5p aaAGAAAGCCaattt GGCUUUCU m8a Created HHFKP_78146_cluster-13957_6_260
hsa-miR-29b-2-5p aaagaAAACCAattt CUGGUUUC m6b Disrupted HHKTA_12031_NM_016836|3227|3266|5.62483233672843|0.170832290671824
hsa-miR-3119 aaagAAAGCCAattt UGGCUUUU m7a Created HHKTA_12031_NM_016836|3227|3266|5.62483233672843|0.170832290671824
hsa-miR-3160-5p aaAGAAAGCCaattt GGCUUUCU m8a Created HHKTA_12031_NM_016836|3227|3266|5.62483233672843|0.170832290671824

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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