SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000321
Gene Symbol: RB1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.48303869G>T COSN8593656 AOCS-123-1-7 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6889-5p cCTCCCCGgcgctcc UCGGGGAG m7b Disrupted HPRO6_22460_G26216.1_48878003
hsa-miR-6777-5p cCTCCCCGgcgctcc ACGGGGAG m7b Disrupted HPRO6_22460_G26216.1_48878003
hsa-miR-6722-3p cctCCCCTGCgctcc UGCAGGGG m7b Created HPRO6_22460_G26216.1_48878003
hsa-miR-339-3p cctccccGGCGCTCc UGAGCGCC m7b Disrupted HPRO6_22460_G26216.1_48878003
hsa-miR-3195 cctccCCGGCGCtcc CGCGCCGG m7b Disrupted HPRO6_22460_G26216.1_48878003
hsa-miR-1909-3p cctCCCCTGCGctcc CGCAGGGG m8a Created HPRO6_22460_G26216.1_48878003

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser