SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0034616
Gene Symbol: RAD51
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.40728762G>A COSM1287519 TARGET-30-PASCJJ [autonomic_ganglia][NS][neuroblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-887-3p ctcgagCGTTCAaca GUGAACGG m6b Disrupted HHFCT_52235_cluster-7235_5_12

Mutation Mutation ID Sample Name Cancer Type
chr15:g.40728761C>T COSM961290 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-887-3p gctcgagCGTTCAac GUGAACGG m6b Disrupted HHFCT_52235_cluster-7235_5_12
Mutation Mutation ID Sample Name Cancer Type
chr15:g.40709056G>A COSM961289 TCGA-BS-A0TJ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr15:g.40709051G>T COSM1742340 413 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4501 taTCACATAaatgtt UAUGUGAC m7a (m6a->m7a) HHFCT_52234_cluster-7235_4_12
hsa-miR-4652-3p tatcACAGAAatgtt GUUCUGUU m6b Disrupted HHFCT_52234_cluster-7235_4_12
hsa-miR-4677-3p taTCACAGAaatgtt UCUGUGAG m7a (m7a->m6a) HHFCT_52234_cluster-7235_4_12
hsa-miR-4679 tATCACAGAaatgtt UCUGUGAU m8a (m8a->m7a) HHFCT_52234_cluster-7235_4_12
hsa-miR-4729 tatcacATAAATGtt UCAUUUAU m7b Created HHFCT_52234_cluster-7235_4_12
hsa-miR-8070 tATCACATaaatgtt AUGUGAUU m7a Created HHFCT_52234_cluster-7235_4_12

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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