SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001244713
Gene Symbol: RAD23B
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.107331854A>G COSN5117830 HX31T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-345-5p ttaaaGAGTCAGCcg GCUGACUC m8a Created HHKTA_40037_NM_002874|3777|3816|1.90378940627731|1.63896068642459

Mutation Mutation ID Sample Name Cancer Type
chr9:g.107331689CAA>C COSM1732823 ACINAR01 [pancreas][NS][carcinoma][acinar_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p ctggaaaCAAAAAaaaa CUUUUUGC m6b Disrupted HHFKP_149519_uc004bde.1_36_86

Mutation Mutation ID Sample Name Cancer Type
chr9:g.107331689C>A COSN9974986 PTC-73C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-5p ctggaaaCAAAAAaa CUUUUUGC m6b Disrupted HHFKP_149519_uc004bde.1_36_86

Mutation Mutation ID Sample Name Cancer Type
chr9:g.107331152G>A COSN9694288 AOCS-139-19-0 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1279 tagcaCAATATGgtg UCAUAUUG m7b Created HHKTA_20704_NM_002874|3054|3093|3.50470322519233|1.63896068642459
hsa-miR-4318 tagCACAGTatggtg CACUGUGG m6b Disrupted HHKTA_20704_NM_002874|3054|3093|3.50470322519233|1.63896068642459
hsa-miR-4693-5p tagCACAGTATggtg AUACUGUG m8a Disrupted HHKTA_20704_NM_002874|3054|3093|3.50470322519233|1.63896068642459
hsa-miR-5008-3p tAGCACAGtatggtg CCUGUGCU m7b Disrupted HHKTA_20704_NM_002874|3054|3093|3.50470322519233|1.63896068642459
hsa-miR-6737-3p tAGCACAGtatggtg UCUGUGCU m7b Disrupted HHKTA_20704_NM_002874|3054|3093|3.50470322519233|1.63896068642459
hsa-miR-7157-3p tAGCACAGtatggtg UCUGUGCU m7b Disrupted HHKTA_20704_NM_002874|3054|3093|3.50470322519233|1.63896068642459
hsa-miR-892a tagCACAGTatggtg CACUGUGU m6b Disrupted HHKTA_20704_NM_002874|3054|3093|3.50470322519233|1.63896068642459
hsa-miR-1279 tagcaCAATATGgtg UCAUAUUG m7b Created HPKTA_61481_G66542.1_110093427
hsa-miR-4318 tagCACAGTatggtg CACUGUGG m6b Disrupted HPKTA_61481_G66542.1_110093427
hsa-miR-4693-5p tagCACAGTATggtg AUACUGUG m8a Disrupted HPKTA_61481_G66542.1_110093427
hsa-miR-5008-3p tAGCACAGtatggtg CCUGUGCU m7b Disrupted HPKTA_61481_G66542.1_110093427
hsa-miR-6737-3p tAGCACAGtatggtg UCUGUGCU m7b Disrupted HPKTA_61481_G66542.1_110093427
hsa-miR-7157-3p tAGCACAGtatggtg UCUGUGCU m7b Disrupted HPKTA_61481_G66542.1_110093427
hsa-miR-892a tagCACAGTatggtg CACUGUGU m6b Disrupted HPKTA_61481_G66542.1_110093427

Mutation Mutation ID Sample Name Cancer Type
chr9:g.107329821A>T COSN8519771 1848_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-144-3p taaATACTGTgcatg UACAGUAU m7b Created HHFCT_161968_uc004bde.1_13_57
hsa-miR-16-1-3p taAATACTGtgcatg CCAGUAUU m7b (m6b->m7b) HHFCT_161968_uc004bde.1_13_57
hsa-miR-4742-3p taAATACAGtgcatg UCUGUAUU m7b (m7b->m6b) HHFCT_161968_uc004bde.1_13_57
hsa-miR-144-3p taaATACTGTgcatg UACAGUAU m7b Created HHFKP_149505_uc004bde.1_20_542
hsa-miR-16-1-3p taAATACTGtgcatg CCAGUAUU m7b (m6b->m7b) HHFKP_149505_uc004bde.1_20_542
hsa-miR-4742-3p taAATACAGtgcatg UCUGUAUU m7b (m7b->m6b) HHFKP_149505_uc004bde.1_20_542

Mutation Mutation ID Sample Name Cancer Type
chr9:g.107329693C>T COSN9275043 C0088T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2054 accagtgTATTACAc CUGUAAUA m7b Created HHFCT_161967_uc004bde.1_12_126
hsa-miR-374c-5p accagTGTATTAcac AUAAUACA m7b Created HHFCT_161967_uc004bde.1_12_126
hsa-miR-501-3p accaGTGCATTacac AAUGCACC m7a Disrupted HHFCT_161967_uc004bde.1_12_126
hsa-miR-502-3p accaGTGCATTacac AAUGCACC m7a Disrupted HHFCT_161967_uc004bde.1_12_126
hsa-miR-655-3p accagTGTATTAcac AUAAUACA m7b Created HHFCT_161967_uc004bde.1_12_126
hsa-miR-6757-3p aCCAGTGTattacac AACACUGG m7b Created HHFCT_161967_uc004bde.1_12_126
hsa-miR-2054 accagtgTATTACAc CUGUAAUA m7b Created HHFKP_149504_uc004bde.1_19_28
hsa-miR-374c-5p accagTGTATTAcac AUAAUACA m7b Created HHFKP_149504_uc004bde.1_19_28
hsa-miR-501-3p accaGTGCATTacac AAUGCACC m7a Disrupted HHFKP_149504_uc004bde.1_19_28
hsa-miR-502-3p accaGTGCATTacac AAUGCACC m7a Disrupted HHFKP_149504_uc004bde.1_19_28
hsa-miR-655-3p accagTGTATTAcac AUAAUACA m7b Created HHFKP_149504_uc004bde.1_19_28
hsa-miR-6757-3p aCCAGTGTattacac AACACUGG m7b Created HHFKP_149504_uc004bde.1_19_28
hsa-miR-2054 accagtgTATTACAc CUGUAAUA m7b Created HHHNE_14963_RAD23B|NM_001244713|exon_utr3|-7.45788843077468|1.16607862775239
hsa-miR-374c-5p accagTGTATTAcac AUAAUACA m7b Created HHHNE_14963_RAD23B|NM_001244713|exon_utr3|-7.45788843077468|1.16607862775239
hsa-miR-501-3p accaGTGCATTacac AAUGCACC m7a Disrupted HHHNE_14963_RAD23B|NM_001244713|exon_utr3|-7.45788843077468|1.16607862775239
hsa-miR-502-3p accaGTGCATTacac AAUGCACC m7a Disrupted HHHNE_14963_RAD23B|NM_001244713|exon_utr3|-7.45788843077468|1.16607862775239
hsa-miR-655-3p accagTGTATTAcac AUAAUACA m7b Created HHHNE_14963_RAD23B|NM_001244713|exon_utr3|-7.45788843077468|1.16607862775239
hsa-miR-6757-3p aCCAGTGTattacac AACACUGG m7b Created HHHNE_14963_RAD23B|NM_001244713|exon_utr3|-7.45788843077468|1.16607862775239
hsa-miR-2054 accagtgTATTACAc CUGUAAUA m7b Created HHHSE_14963_RAD23B|NM_001244713|exon_utr3|-7.45788843077468|1.16607862775239
hsa-miR-374c-5p accagTGTATTAcac AUAAUACA m7b Created HHHSE_14963_RAD23B|NM_001244713|exon_utr3|-7.45788843077468|1.16607862775239
hsa-miR-501-3p accaGTGCATTacac AAUGCACC m7a Disrupted HHHSE_14963_RAD23B|NM_001244713|exon_utr3|-7.45788843077468|1.16607862775239
hsa-miR-502-3p accaGTGCATTacac AAUGCACC m7a Disrupted HHHSE_14963_RAD23B|NM_001244713|exon_utr3|-7.45788843077468|1.16607862775239
hsa-miR-655-3p accagTGTATTAcac AUAAUACA m7b Created HHHSE_14963_RAD23B|NM_001244713|exon_utr3|-7.45788843077468|1.16607862775239
hsa-miR-6757-3p aCCAGTGTattacac AACACUGG m7b Created HHHSE_14963_RAD23B|NM_001244713|exon_utr3|-7.45788843077468|1.16607862775239
hsa-miR-2054 accagtgTATTACAc CUGUAAUA m7b Created HHKTA_20703_NM_002874|1603|1642|3.50470322519233|1.63896068642459
hsa-miR-374c-5p accagTGTATTAcac AUAAUACA m7b Created HHKTA_20703_NM_002874|1603|1642|3.50470322519233|1.63896068642459
hsa-miR-501-3p accaGTGCATTacac AAUGCACC m7a Disrupted HHKTA_20703_NM_002874|1603|1642|3.50470322519233|1.63896068642459
hsa-miR-502-3p accaGTGCATTacac AAUGCACC m7a Disrupted HHKTA_20703_NM_002874|1603|1642|3.50470322519233|1.63896068642459
hsa-miR-655-3p accagTGTATTAcac AUAAUACA m7b Created HHKTA_20703_NM_002874|1603|1642|3.50470322519233|1.63896068642459
hsa-miR-6757-3p aCCAGTGTattacac AACACUGG m7b Created HHKTA_20703_NM_002874|1603|1642|3.50470322519233|1.63896068642459
hsa-miR-2054 accagtgTATTACAc CUGUAAUA m7b Created HHRBL_14945_BCBL1-2of3-SCL_2215
hsa-miR-374c-5p accagTGTATTAcac AUAAUACA m7b Created HHRBL_14945_BCBL1-2of3-SCL_2215
hsa-miR-501-3p accaGTGCATTacac AAUGCACC m7a Disrupted HHRBL_14945_BCBL1-2of3-SCL_2215
hsa-miR-502-3p accaGTGCATTacac AAUGCACC m7a Disrupted HHRBL_14945_BCBL1-2of3-SCL_2215
hsa-miR-655-3p accagTGTATTAcac AUAAUACA m7b Created HHRBL_14945_BCBL1-2of3-SCL_2215
hsa-miR-6757-3p aCCAGTGTattacac AACACUGG m7b Created HHRBL_14945_BCBL1-2of3-SCL_2215
hsa-miR-2054 accagtgTATTACAc CUGUAAUA m7b Created HPCB1_41455_G52993.1_110091970
hsa-miR-374c-5p accagTGTATTAcac AUAAUACA m7b Created HPCB1_41455_G52993.1_110091970
hsa-miR-501-3p accaGTGCATTacac AAUGCACC m7a Disrupted HPCB1_41455_G52993.1_110091970
hsa-miR-502-3p accaGTGCATTacac AAUGCACC m7a Disrupted HPCB1_41455_G52993.1_110091970
hsa-miR-655-3p accagTGTATTAcac AUAAUACA m7b Created HPCB1_41455_G52993.1_110091970
hsa-miR-6757-3p aCCAGTGTattacac AACACUGG m7b Created HPCB1_41455_G52993.1_110091970
hsa-miR-2054 accagtgTATTACAc CUGUAAUA m7b Created HPCB3_24036_G33016.1_110091970
hsa-miR-374c-5p accagTGTATTAcac AUAAUACA m7b Created HPCB3_24036_G33016.1_110091970
hsa-miR-501-3p accaGTGCATTacac AAUGCACC m7a Disrupted HPCB3_24036_G33016.1_110091970
hsa-miR-502-3p accaGTGCATTacac AAUGCACC m7a Disrupted HPCB3_24036_G33016.1_110091970
hsa-miR-655-3p accagTGTATTAcac AUAAUACA m7b Created HPCB3_24036_G33016.1_110091970
hsa-miR-6757-3p aCCAGTGTattacac AACACUGG m7b Created HPCB3_24036_G33016.1_110091970
hsa-miR-2054 accagtgTATTACAc CUGUAAUA m7b Created HPRO8_14622_G19615.2_110091985
hsa-miR-374c-5p accagTGTATTAcac AUAAUACA m7b Created HPRO8_14622_G19615.2_110091985
hsa-miR-501-3p accaGTGCATTacac AAUGCACC m7a Disrupted HPRO8_14622_G19615.2_110091985
hsa-miR-502-3p accaGTGCATTacac AAUGCACC m7a Disrupted HPRO8_14622_G19615.2_110091985
hsa-miR-655-3p accagTGTATTAcac AUAAUACA m7b Created HPRO8_14622_G19615.2_110091985
hsa-miR-6757-3p aCCAGTGTattacac AACACUGG m7b Created HPRO8_14622_G19615.2_110091985
hsa-miR-2054 accagtgTATTACAc CUGUAAUA m7b Created HPSLB_7523_G9172.1_110091975
hsa-miR-374c-5p accagTGTATTAcac AUAAUACA m7b Created HPSLB_7523_G9172.1_110091975
hsa-miR-501-3p accaGTGCATTacac AAUGCACC m7a Disrupted HPSLB_7523_G9172.1_110091975
hsa-miR-502-3p accaGTGCATTacac AAUGCACC m7a Disrupted HPSLB_7523_G9172.1_110091975
hsa-miR-655-3p accagTGTATTAcac AUAAUACA m7b Created HPSLB_7523_G9172.1_110091975
hsa-miR-6757-3p aCCAGTGTattacac AACACUGG m7b Created HPSLB_7523_G9172.1_110091975

Mutation Mutation ID Sample Name Cancer Type
chr9:g.107329639A>G COSM4934554 TCGA-DD-A39Y-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-148a-5p acagcAGAACTTTga AAAGUUCU m8a Disrupted HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-148b-5p acagCAGAACTTtga AAGUUCUG m8a Disrupted HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-3692-5p aCAGCAGGactttga CCUGCUGG m7a Created HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-370-3p aCAGCAGGactttga GCCUGCUG m7b Created HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-561-3p acagcagAACTTTGa CAAAGUUU m7a Disrupted HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-6071 aCAGCAGAActttga UUCUGCUG m8a (m8a->m7a) HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-6507-3p acagcaGGACTTTGa CAAAGUCC m8a Created HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-6828-3p acAGCAGAactttga AUCUGCUC m6b Disrupted HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-6838-3p acagCAGGACTTtga AAGUCCUG m8a Created HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-6874-3p acagCAGAACTttga CAGUUCUG m7b Disrupted HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-6893-3p aCAGCAGGactttga CCCUGCUG m7b Created HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-148a-5p acagcAGAACTTTga AAAGUUCU m8a Disrupted HPCB1_41454_G52992.1_110091911
hsa-miR-148b-5p acagCAGAACTTtga AAGUUCUG m8a Disrupted HPCB1_41454_G52992.1_110091911
hsa-miR-3692-5p aCAGCAGGactttga CCUGCUGG m7a Created HPCB1_41454_G52992.1_110091911
hsa-miR-370-3p aCAGCAGGactttga GCCUGCUG m7b Created HPCB1_41454_G52992.1_110091911
hsa-miR-561-3p acagcagAACTTTGa CAAAGUUU m7a Disrupted HPCB1_41454_G52992.1_110091911
hsa-miR-6071 aCAGCAGAActttga UUCUGCUG m8a (m8a->m7a) HPCB1_41454_G52992.1_110091911
hsa-miR-6507-3p acagcaGGACTTTGa CAAAGUCC m8a Created HPCB1_41454_G52992.1_110091911
hsa-miR-6828-3p acAGCAGAactttga AUCUGCUC m6b Disrupted HPCB1_41454_G52992.1_110091911
hsa-miR-6838-3p acagCAGGACTTtga AAGUCCUG m8a Created HPCB1_41454_G52992.1_110091911
hsa-miR-6874-3p acagCAGAACTttga CAGUUCUG m7b Disrupted HPCB1_41454_G52992.1_110091911
hsa-miR-6893-3p aCAGCAGGactttga CCCUGCUG m7b Created HPCB1_41454_G52992.1_110091911

Mutation Mutation ID Sample Name Cancer Type
chr9:g.107329632A>G COSM4588328 08-P1004 [bone][NS][Ewings_sarcoma-peripheral_primitive_neuroectodermal_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1537-5p ttcttcTACAGCaga AGCUGUAA m6b Disrupted HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-298 ttCTTCTGCagcaga AGCAGAAG m7b (m6b->m7b) HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-3158-5p ttctTCTGCAGcaga CCUGCAGA m7b Created HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-4718 ttcttcTACAGCaga AGCUGUAC m6b Disrupted HHRBC_13339_BC3-2of3-SCL_7064
hsa-miR-1537-5p ttcttcTACAGCaga AGCUGUAA m6b Disrupted HPCB1_41454_G52992.1_110091911
hsa-miR-298 ttCTTCTGCagcaga AGCAGAAG m7b (m6b->m7b) HPCB1_41454_G52992.1_110091911
hsa-miR-3158-5p ttctTCTGCAGcaga CCUGCAGA m7b Created HPCB1_41454_G52992.1_110091911
hsa-miR-4718 ttcttcTACAGCaga AGCUGUAC m6b Disrupted HPCB1_41454_G52992.1_110091911
hsa-miR-1537-5p ttcttcTACAGCaga AGCUGUAA m6b Disrupted HPSD1_9542_G12535.1_110091895
hsa-miR-298 ttCTTCTGCagcaga AGCAGAAG m7b (m6b->m7b) HPSD1_9542_G12535.1_110091895
hsa-miR-3158-5p ttctTCTGCAGcaga CCUGCAGA m7b Created HPSD1_9542_G12535.1_110091895
hsa-miR-4718 ttcttcTACAGCaga AGCUGUAC m6b Disrupted HPSD1_9542_G12535.1_110091895

Mutation Mutation ID Sample Name Cancer Type
chr9:g.107329606G>A COSM3847284 TCGA-AC-A23H-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5571-5p gaagaatGAGAATTt CAAUUCUC m7b Disrupted HHHNE_14962_RAD23B|NM_001244713|exon_CDS|-6.32972438619012|-0.597450602705647
hsa-miR-6758-3p gaaGAATGAGaattt ACUCAUUC m7b Disrupted HHHNE_14962_RAD23B|NM_001244713|exon_CDS|-6.32972438619012|-0.597450602705647
hsa-miR-5571-5p gaagaatGAGAATTt CAAUUCUC m7b Disrupted HHHSE_14962_RAD23B|NM_001244713|exon_CDS|-6.32972438619012|-0.597450602705647
hsa-miR-6758-3p gaaGAATGAGaattt ACUCAUUC m7b Disrupted HHHSE_14962_RAD23B|NM_001244713|exon_CDS|-6.32972438619012|-0.597450602705647

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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