SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001135769
Gene Symbol: PVR
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.44663615A>G COSN1769375 RK027_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6505-3p tgtgGAAGTCAagga UGACUUCU m7a Created HHHSH_2978_PVR|NM_001135769|exon_utr3|-7.45100295395101|-0.478588035531857
hsa-miR-617 tgtGGAAGTCaagga AGACUUCC m7b Created HHHSH_2978_PVR|NM_001135769|exon_utr3|-7.45100295395101|-0.478588035531857
hsa-miR-6505-3p tgtgGAAGTCAagga UGACUUCU m7a Created HHHSH_2978_PVR|NM_001135769|exon_utr3|-7.45100295395101|-0.478588035531857
hsa-miR-617 tgtGGAAGTCaagga AGACUUCC m7b Created HHHSH_2978_PVR|NM_001135769|exon_utr3|-7.45100295395101|-0.478588035531857

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser