SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0011197
Gene Symbol: PTPRU
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.29260807G>A COSM4719378 T3225 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3147 cgacCCCAACacaga GGUUGGGC m6b Created HHFKP_9285_cluster-253_6_34
hsa-miR-6812-5p cgACCCCAacacaga AUGGGGUG m6b Created HHFKP_9285_cluster-253_6_34
hsa-miR-6812-5p cgACCCCAacacaga AUGGGGUG m6b Created HHFKP_9285_cluster-253_6_34
hsa-miR-5572 cgACCCCAACacaga GUUGGGGU m8a Created HHFKP_9285_cluster-253_6_34
hsa-miR-6812-5p cgACCCCAacacaga AUGGGGUG m6b Created HHFKP_9285_cluster-253_6_34
hsa-miR-5572 cgACCCCAACacaga GUUGGGGU m8a Created HHFKP_9285_cluster-253_6_34
hsa-miR-3147 cgacCCCAACacaga GGUUGGGC m6b Created HHFKP_9285_cluster-253_6_34
hsa-miR-5572 cgACCCCAACacaga GUUGGGGU m8a Created HHFKP_9285_cluster-253_6_34
hsa-miR-3147 cgacCCCAACacaga GGUUGGGC m6b Created HHFKP_9285_cluster-253_6_34

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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