SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0046807
Gene Symbol: PTPRM
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.8376169C>T COSM4073586 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1228-5p gagcCCGCCCAgtgc GUGGGCGG m7b Disrupted HHRBL_6895_BCBL1-2of3-SCL_514
hsa-miR-3654 gagcccGTCCAGTgc GACUGGAC m7b Created HHRBL_6895_BCBL1-2of3-SCL_514
hsa-miR-4486 gagccCGCCCAGtgc GCUGGGCG m7b Disrupted HHRBL_6895_BCBL1-2of3-SCL_514
hsa-miR-4804-5p gagcCCGTCCAgtgc UUGGACGG m7b Created HHRBL_6895_BCBL1-2of3-SCL_514
hsa-miR-1228-5p gagcCCGCCCAgtgc GUGGGCGG m7b Disrupted HHRBL_6895_BCBL1-2of3-SCL_514
hsa-miR-3654 gagcccGTCCAGTgc GACUGGAC m7b Created HHRBL_6895_BCBL1-2of3-SCL_514
hsa-miR-4486 gagccCGCCCAGtgc GCUGGGCG m7b Disrupted HHRBL_6895_BCBL1-2of3-SCL_514
hsa-miR-4804-5p gagcCCGTCCAgtgc UUGGACGG m7b Created HHRBL_6895_BCBL1-2of3-SCL_514

Mutation Mutation ID Sample Name Cancer Type
chr18:g.8376162G>C COSM3959431 296_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4675 agtccaACAGCCCgc GGGGCUGU m7b Created HHRBL_6895_BCBL1-2of3-SCL_514
hsa-miR-4687-3p agtccAACAGCCcgc UGGCUGUU m7b Created HHRBL_6895_BCBL1-2of3-SCL_514
hsa-miR-4741 agtccaACAGCCCGc CGGGCUGU m8a Created HHRBL_6895_BCBL1-2of3-SCL_514
hsa-miR-4675 agtccaACAGCCCgc GGGGCUGU m7b Created HHRBL_6895_BCBL1-2of3-SCL_514
hsa-miR-4687-3p agtccAACAGCCcgc UGGCUGUU m7b Created HHRBL_6895_BCBL1-2of3-SCL_514
hsa-miR-4741 agtccaACAGCCCGc CGGGCUGU m8a Created HHRBL_6895_BCBL1-2of3-SCL_514

Mutation Mutation ID Sample Name Cancer Type
chr18:g.8370943A>C COSM269976 TCGA-AA-3715-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-569 aCATTAACgttaccc AGUUAAUG m7b Created HHFKP_67282_uc010dkv.1_83_76

Mutation Mutation ID Sample Name Cancer Type
chr18:g.8370936A>G COSM4073580 TCGA-CG-5728-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-155-5p tataaagGCATTAAa UUAAUGCU m7a Created HHFKP_67282_uc010dkv.1_83_76
hsa-miR-365a-3p tataaaGGCATTAaa UAAUGCCC m7a Created HHFKP_67282_uc010dkv.1_83_76
hsa-miR-365b-3p tataaaGGCATTAaa UAAUGCCC m7a Created HHFKP_67282_uc010dkv.1_83_76
hsa-miR-511-5p tatAAAGACAttaaa GUGUCUUU m7b Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-513b-3p tataaaGACATTaaa AAAUGUCA m6b Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-532-5p tataAAGGCATtaaa CAUGCCUU m7b Created HHFKP_67282_uc010dkv.1_83_76
hsa-miR-155-5p tataaagGCATTAAa UUAAUGCU m7a Created HHFKP_67282_uc010dkv.1_83_76
hsa-miR-365a-3p tataaaGGCATTAaa UAAUGCCC m7a Created HHFKP_67282_uc010dkv.1_83_76
hsa-miR-365b-3p tataaaGGCATTAaa UAAUGCCC m7a Created HHFKP_67282_uc010dkv.1_83_76
hsa-miR-511-5p tatAAAGACAttaaa GUGUCUUU m7b Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-513b-3p tataaaGACATTaaa AAAUGUCA m6b Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-532-5p tataAAGGCATtaaa CAUGCCUU m7b Created HHFKP_67282_uc010dkv.1_83_76

Mutation Mutation ID Sample Name Cancer Type
chr18:g.8370926A>T COSM4073579 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-190a-3p cacagagATATATAa CUAUAUAU m7b Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-3664-5p cACAGAGTTatataa AACUCUGU m8a (m7a->m8a) HHFKP_67282_uc010dkv.1_83_76
hsa-miR-3675-3p cacAGAGATatataa CAUCUCUA m6b Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-410-3p cacagaGTTATATaa AAUAUAAC m7b Created HHFKP_67282_uc010dkv.1_83_76
hsa-miR-4714-5p caCAGAGTTatataa AACUCUGA m7a (m6a->m7a) HHFKP_67282_uc010dkv.1_83_76
hsa-miR-5011-5p cacagagATATATAa UAUAUAUA m7a Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-618 cacAGAGTTatataa AAACUCUA m6b Created HHFKP_67282_uc010dkv.1_83_76
hsa-miR-190a-3p cacagagATATATAa CUAUAUAU m7b Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-3664-5p cACAGAGTTatataa AACUCUGU m8a (m7a->m8a) HHFKP_67282_uc010dkv.1_83_76
hsa-miR-3675-3p cacAGAGATatataa CAUCUCUA m6b Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-410-3p cacagaGTTATATaa AAUAUAAC m7b Created HHFKP_67282_uc010dkv.1_83_76
hsa-miR-4714-5p caCAGAGTTatataa AACUCUGA m7a (m6a->m7a) HHFKP_67282_uc010dkv.1_83_76
hsa-miR-5011-5p cacagagATATATAa UAUAUAUA m7a Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-618 cacAGAGTTatataa AAACUCUA m6b Created HHFKP_67282_uc010dkv.1_83_76

Mutation Mutation ID Sample Name Cancer Type
chr18:g.8370923G>C COSM4818340 TCGA-IR-A3LK-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3675-3p tgacacAGAGATata CAUCUCUA m6b Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-3675-3p tgacacAGAGATata CAUCUCUA m6b Disrupted HHFKP_67282_uc010dkv.1_83_76

Mutation Mutation ID Sample Name Cancer Type
chr18:g.8370917G>A COSM4437457 468 [oesophagus][upper_third][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1298-3p gCCAGATGacacaga CAUCUGGG m7a Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-3126-3p GCCAGATGacacaga CAUCUGGC m8a Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-452-3p gcCAGATGAcacaga CUCAUCUG m7b (m7b->m6b) HHFKP_67282_uc010dkv.1_83_76
hsa-miR-592 gccagaTGACACAga UUGUGUCA m7b Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-1298-3p gCCAGATGacacaga CAUCUGGG m7a Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-3126-3p GCCAGATGacacaga CAUCUGGC m8a Disrupted HHFKP_67282_uc010dkv.1_83_76
hsa-miR-452-3p gcCAGATGAcacaga CUCAUCUG m7b (m7b->m6b) HHFKP_67282_uc010dkv.1_83_76
hsa-miR-592 gccagaTGACACAga UUGUGUCA m7b Disrupted HHFKP_67282_uc010dkv.1_83_76

Mutation Mutation ID Sample Name Cancer Type
chr18:g.8302049T>G COSN8551970 tumor_4166706 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-572 caaGAGCGGACaggg GUCCGCUC m8a Created HHFCT_71785_uc010dkv.1_124_8
hsa-miR-6748-3p caagagcGGACAGGg UCCUGUCC m7b Created HHFCT_71785_uc010dkv.1_124_8
hsa-miR-6812-3p cAAGAGCGGacaggg CCGCUCUU m8a (m7a->m8a) HHFCT_71785_uc010dkv.1_124_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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