SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0046800
Gene Symbol: PTPRM
Browse Associations
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr18:g.7851754G>T COSN8255768 PCSI_0084_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3938 gtgcAGGGAATaagg AAUUCCCU m7b Disrupted HHFCT_71737_uc010dkv.1_75_8
hsa-miR-556-3p gtgcaGGTAATAagg AUAUUACC m7b Created HHFCT_71737_uc010dkv.1_75_8
hsa-miR-670-5p gtgCAGGGAataagg GUCCCUGA m6b Disrupted HHFCT_71737_uc010dkv.1_75_8
hsa-miR-6752-3p gtGCAGGGAataagg UCCCUGCC m7a (m7a->m6a) HHFCT_71737_uc010dkv.1_75_8

Mutation Mutation ID Sample Name Cancer Type
chr18:g.7827363C>A COSN7352815 8034061 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3154 tgtagCCCTTCTGga CAGAAGGG m8a Disrupted HHFCT_71731_uc010dkv.1_69_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser