SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

Transcript ID:	NM_001145369
Gene Symbol:	PTPN3
Browse Associations

Somatic mutations that impact miRNA target sites

Mutation		Mutation ID	Sample Name	Cancer Type
chr9:g.109406567A>T		COSM1635966	RK021_C01	[liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation		Mutation ID	Sample Name	Cancer Type
chr9:g.109406563G>A		COSM4718966	T368	[large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-6850-3p	atcaatGGCCGGGac	CCCGGCCG	m7a	Disrupted	HPTA1_11519_G16550.1_112168839
hsa-miR-616-3p	atCAATGACcgggac	AGUCAUUG	m7b	(m6b->m7b)	HPTA1_11519_G16550.1_112168839
hsa-miR-4783-3p	atcaatgACCGGGac	CCCCGGUG	m6b	Created	HPTA1_11519_G16550.1_112168839

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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