SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0015729
Gene Symbol: PTGS2
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.186676665G>A COSM3480329 TCGA-EE-A29L-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3152-5p tcAGGCAAagatgat AUUGCCUC m6b Created HHFKP_5768_cluster-2068_17_237
hsa-miR-5001-3p tcAGGCAGAgatgat UUCUGCCU m7b (m7b->m6b) HHFKP_5768_cluster-2068_17_237
hsa-miR-4774-3p tcAGGCAAagatgat AUUGCCUA m6b Created HHFKP_5768_cluster-2068_17_237
hsa-miR-5001-3p tcAGGCAGAgatgat UUCUGCCU m7b (m7b->m6b) HHFKP_5768_cluster-2068_17_237
hsa-miR-4774-3p tcAGGCAAagatgat AUUGCCUA m6b Created HHFKP_5768_cluster-2068_17_237
hsa-miR-3675-3p tcaggcAGAGATGat CAUCUCUA m7a Disrupted HHFKP_5768_cluster-2068_17_237
hsa-miR-3152-5p tcAGGCAAagatgat AUUGCCUC m6b Created HHFKP_5768_cluster-2068_17_237
hsa-miR-3675-3p tcaggcAGAGATGat CAUCUCUA m7a Disrupted HHFKP_5768_cluster-2068_17_237

Mutation Mutation ID Sample Name Cancer Type
chr1:g.186676629C>T COSM4026190 TCGA-HU-A4G8-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6715a-3p gcatctaTGGTTTGc CCAAACCA m7b Created HHFKP_5768_cluster-2068_17_237
hsa-miR-1537-3p gcatctACGGTTTgc AAAACCGU m7b Disrupted HHFKP_5768_cluster-2068_17_237
hsa-miR-6715a-3p gcatctaTGGTTTGc CCAAACCA m7b Created HHFKP_5768_cluster-2068_17_237
hsa-miR-1537-3p gcatctACGGTTTgc AAAACCGU m7b Disrupted HHFKP_5768_cluster-2068_17_237

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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