SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000963
Gene Symbol: PTGS2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.186679131C>A COSM4802294 CHC1751T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-183-3p ttacccAATTCAagg GUGAAUUA m6b Created HHFKP_5769_cluster-2068_18_68
hsa-miR-219a-2-3p ttaccCAATTCaagg AGAAUUGU m6b Created HHFKP_5769_cluster-2068_18_68
hsa-miR-219b-3p ttaccCAATTCaagg AGAAUUGC m6b Created HHFKP_5769_cluster-2068_18_68
hsa-miR-3616-5p ttaccCACTTCAagg AUGAAGUG m7b Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-4635 ttacccaCTTCAAGg UCUUGAAG m7b Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-4795-5p ttacCCACTTCaagg AGAAGUGG m7b Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-573 ttaccCACTTCAagg CUGAAGUG m7b Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-183-3p ttacccAATTCAagg GUGAAUUA m6b Created HHFKP_5769_cluster-2068_18_68
hsa-miR-219a-2-3p ttaccCAATTCaagg AGAAUUGU m6b Created HHFKP_5769_cluster-2068_18_68
hsa-miR-219b-3p ttaccCAATTCaagg AGAAUUGC m6b Created HHFKP_5769_cluster-2068_18_68
hsa-miR-3616-5p ttaccCACTTCAagg AUGAAGUG m7b Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-4635 ttacccaCTTCAAGg UCUUGAAG m7b Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-4795-5p ttacCCACTTCaagg AGAAGUGG m7b Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-573 ttaccCACTTCAagg CUGAAGUG m7b Disrupted HHFKP_5769_cluster-2068_18_68

Mutation Mutation ID Sample Name Cancer Type
chr1:g.186679126A>G COSM1263325 ESO-R61 [oesophagus][lower_third][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-188-5p cacttcAAGGGATtt CAUCCCUU m7b Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-331-3p cacttCAGGGGattt GCCCCUGG m6b Created HHFKP_5769_cluster-2068_18_68
hsa-miR-345-3p cacTTCAGGGgattt GCCCUGAA m7b Created HHFKP_5769_cluster-2068_18_68
hsa-miR-4635 caCTTCAAGggattt UCUUGAAG m7b (m7b->m6b) HHFKP_5769_cluster-2068_18_68
hsa-miR-4780 cactTCAAGGGattt ACCCUUGA m7b Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-573 CACTTCAGgggattt CUGAAGUG m8a Created HHFKP_5769_cluster-2068_18_68
hsa-miR-623 cacttCAAGGGATtt AUCCCUUG m8a Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-6801-3p cacttCAGGGGattt ACCCCUGC m6b Created HHFKP_5769_cluster-2068_18_68
hsa-miR-6866-3p cacttcAAGGGATtt GAUCCCUU m7b Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-188-5p cacttcAAGGGATtt CAUCCCUU m7b Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-331-3p cacttCAGGGGattt GCCCCUGG m6b Created HHFKP_5769_cluster-2068_18_68
hsa-miR-345-3p cacTTCAGGGgattt GCCCUGAA m7b Created HHFKP_5769_cluster-2068_18_68
hsa-miR-4635 caCTTCAAGggattt UCUUGAAG m7b (m7b->m6b) HHFKP_5769_cluster-2068_18_68
hsa-miR-4780 cactTCAAGGGattt ACCCUUGA m7b Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-573 CACTTCAGgggattt CUGAAGUG m8a Created HHFKP_5769_cluster-2068_18_68
hsa-miR-623 cacttCAAGGGATtt AUCCCUUG m8a Disrupted HHFKP_5769_cluster-2068_18_68
hsa-miR-6801-3p cacttCAGGGGattt ACCCCUGC m6b Created HHFKP_5769_cluster-2068_18_68
hsa-miR-6866-3p cacttcAAGGGATtt GAUCCCUU m7b Disrupted HHFKP_5769_cluster-2068_18_68

Mutation Mutation ID Sample Name Cancer Type
chr1:g.186674267T>C COSN6012382 RK308_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4803 ccTTATGTTActtaa UAACAUAA m8a Disrupted HHFKP_5767_cluster-2068_16_20
hsa-miR-562 ccttatGCTACTTaa AAAGUAGC m7b Created HHFKP_5767_cluster-2068_16_20
hsa-miR-802 ccttaTGTTACTtaa CAGUAACA m7b Disrupted HHFKP_5767_cluster-2068_16_20

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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