SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001243936
Gene Symbol: PRPSAP2
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.18865173T>G COSN1714876 RK126_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-424-3p agggacCGTTTTatt CAAAACGU m6b Created HHFKP_62622_cluster-9410_2_33
hsa-miR-4746-5p aGGGACCGttttatt CCGGUCCC m7b Created HHFKP_62622_cluster-9410_2_33
hsa-miR-548ad-3p agggacCGTTTTatt GAAAACGA m6b Created HHFKP_62622_cluster-9410_2_33
hsa-miR-553 agggACCGTTTTatt AAAACGGU m8a Created HHFKP_62622_cluster-9410_2_33

Mutation Mutation ID Sample Name Cancer Type
chr17:g.18865149C>T COSN6100178 RK217_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5094 accagCACTGATgat AAUCAGUG m7b Disrupted HHFKP_62622_cluster-9410_2_33
hsa-miR-512-3p acCAGCACTgatgat AAGUGCUG m7b (m7b->m6b) HHFKP_62622_cluster-9410_2_33

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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