SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001080408
Gene Symbol: PROX2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.74856935A>T COSM4438462 476 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6504-3p tggaTGTAATaaaac CAUUACAG m6b Disrupted HPSLB_2335_G2821.1_75323630
hsa-miR-556-3p tggatGTAATAaaac AUAUUACC m6b Disrupted HPSLB_2335_G2821.1_75323630
hsa-miR-3143 tggATGTTATaaaac AUAACAUU m7a Created HPSLB_2335_G2821.1_75323630
hsa-miR-6504-3p tggaTGTAATaaaac CAUUACAG m6b Disrupted HPSLB_2335_G2821.1_75323630
hsa-miR-556-3p tggatGTAATAaaac AUAUUACC m6b Disrupted HPSLB_2335_G2821.1_75323630
hsa-miR-3143 tggATGTTATaaaac AUAACAUU m7a Created HPSLB_2335_G2821.1_75323630

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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