SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001099403
Gene Symbol: PRDM8

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.80201490C>T COSM4493777 CSCC-29-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6501-3p tctTGCTCTGcccct CCAGAGCA m7b Disrupted HPRO8_10702_G14326.1_81122640
hsa-miR-486-3p tcttgctCTGCCCCt CGGGGCAG m7b Disrupted HPRO8_10702_G14326.1_81122640
hsa-miR-330-3p tctTGCTTTGCccct GCAAAGCA m8a Created HPRO8_10702_G14326.1_81122640

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser