SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0070818
Gene Symbol: PRDM5
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.120835915C>A COSN7728546 8033414 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-33a-3p tccaaggAAACATTa CAAUGUUU m7b Created HHFCT_116174_cluster-17783_14_7
hsa-miR-409-3p tccaaggCAACATTa GAAUGUUG m7b Disrupted HHFCT_116174_cluster-17783_14_7
hsa-miR-4307 tccaaggAAACATTa AAUGUUUU m7a Created HHFCT_116174_cluster-17783_14_7
hsa-miR-4312 tcCAAGGCaacatta GGCCUUGU m6b Disrupted HHFCT_116174_cluster-17783_14_7
hsa-miR-4423-5p tccaAGGCAACatta AGUUGCCU m7b Disrupted HHFCT_116174_cluster-17783_14_7
hsa-miR-4781-3p tccaaggCAACATTa AAUGUUGG m7a Disrupted HHFCT_116174_cluster-17783_14_7
hsa-miR-502-5p tcCAAGGAaacatta AUCCUUGC m6b Created HHFCT_116174_cluster-17783_14_7
hsa-miR-6501-5p tccaaGGCAACatta AGUUGCCA m6b Disrupted HHFCT_116174_cluster-17783_14_7
hsa-miR-744-3p tccaaGGCAACAtta CUGUUGCC m7b Disrupted HHFCT_116174_cluster-17783_14_7

Mutation Mutation ID Sample Name Cancer Type
chr4:g.120831911G>A COSN9587477 AOCS-120-3-6 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-499a-3p atGTGATGTggacca AACAUCAC m7b (m7b->m6b) HHFKP_107741_cluster-17783_3_8
hsa-miR-499b-3p atGTGATGTggacca AACAUCAC m7b (m7b->m6b) HHFKP_107741_cluster-17783_3_8
Mutation Mutation ID Sample Name Cancer Type
chr4:g.120811428T>C COSM4935359 TCGA-DD-A73D-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr4:g.120811420G>A COSM1738950 M001-PB [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][mantle_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4724-5p atGTTCAGTgtgcaa AACUGAAC m7b (m7b->m6b) HHHNA_17501_PRDM5|NM_018699|exon_CDS|-3.79694348810396|2.36943968126389
hsa-miR-5589-3p atgttcaATGTGCAa UGCACAUG m7a Created HHHNA_17501_PRDM5|NM_018699|exon_CDS|-3.79694348810396|2.36943968126389
hsa-miR-8064 atgttcAGTGTGCaa AGCACACU m7b Disrupted HHHNA_17501_PRDM5|NM_018699|exon_CDS|-3.79694348810396|2.36943968126389
hsa-miR-4724-5p atGTTCAGTgtgcaa AACUGAAC m7b (m7b->m6b) HHHSA_17501_PRDM5|NM_018699|exon_CDS|-3.79694348810396|2.36943968126389
hsa-miR-5589-3p atgttcaATGTGCAa UGCACAUG m7a Created HHHSA_17501_PRDM5|NM_018699|exon_CDS|-3.79694348810396|2.36943968126389
hsa-miR-8064 atgttcAGTGTGCaa AGCACACU m7b Disrupted HHHSA_17501_PRDM5|NM_018699|exon_CDS|-3.79694348810396|2.36943968126389

Mutation Mutation ID Sample Name Cancer Type
chr4:g.120811403T>C COSM4121655 TCGA-CG-5721-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3185 aaaagtgTTCTTCag AGAAGAAG m6b Disrupted HHHNA_17501_PRDM5|NM_018699|exon_CDS|-3.79694348810396|2.36943968126389
hsa-miR-4511 aaaagtGTTCTTCag GAAGAACU m7a Disrupted HHHNA_17501_PRDM5|NM_018699|exon_CDS|-3.79694348810396|2.36943968126389
hsa-miR-4709-3p aaaagtgCTCTTCAg UUGAAGAG m7b Created HHHNA_17501_PRDM5|NM_018699|exon_CDS|-3.79694348810396|2.36943968126389
hsa-miR-3185 aaaagtgTTCTTCag AGAAGAAG m6b Disrupted HHHSA_17501_PRDM5|NM_018699|exon_CDS|-3.79694348810396|2.36943968126389
hsa-miR-4511 aaaagtGTTCTTCag GAAGAACU m7a Disrupted HHHSA_17501_PRDM5|NM_018699|exon_CDS|-3.79694348810396|2.36943968126389
hsa-miR-4709-3p aaaagtgCTCTTCAg UUGAAGAG m7b Created HHHSA_17501_PRDM5|NM_018699|exon_CDS|-3.79694348810396|2.36943968126389

Mutation Mutation ID Sample Name Cancer Type
chr4:g.120791888G>A COSN4824986 tumor_4177987 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-205-5p cacATGAAGGAgaaa UCCUUCAU m8a Created HHFCT_116168_cluster-17783_8_6
hsa-miR-4279 cacatgaAGGAGAaa CUCUCCUC m6b Created HHFCT_116168_cluster-17783_8_6
hsa-miR-4287 cacatgAGGGAGAaa UCUCCCUU m7a Disrupted HHFCT_116168_cluster-17783_8_6
hsa-miR-4469 cacatGAGGGAGaaa GCUCCCUC m7b Disrupted HHFCT_116168_cluster-17783_8_6
hsa-miR-4685-3p cacatgAGGGAGAaa UCUCCCUU m7a Disrupted HHFCT_116168_cluster-17783_8_6
hsa-miR-4713-5p cacatgaGGGAGAAa UUCUCCCA m7a Disrupted HHFCT_116168_cluster-17783_8_6
hsa-miR-629-3p cacatgaGGGAGAAa GUUCUCCC m7b Disrupted HHFCT_116168_cluster-17783_8_6
hsa-miR-6867-3p cacatgAGGGAGAaa CUCUCCCU m7b Disrupted HHFCT_116168_cluster-17783_8_6
hsa-miR-6891-3p cacATGAGGGagaaa CCCUCAUC m7a Disrupted HHFCT_116168_cluster-17783_8_6
hsa-miR-7113-3p cacatgAGGGAGaaa CCUCCCUG m6b Disrupted HHFCT_116168_cluster-17783_8_6

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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