SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_022114
Gene Symbol: PRDM16

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.3385361C>A COSN7217288 8016470 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4764-5p tcggCACATCCAcca UGGAUGUG m8a Created HPTA4_189_G1043.1_3301934
hsa-miR-6851-5p tcggCACCTCCacca AGGAGGUG m7b Disrupted HPTA4_189_G1043.1_3301934
hsa-miR-6880-5p tcggcacCTCCACCa UGGUGGAG m7b Disrupted HPTA4_189_G1043.1_3301934
hsa-miR-7847-3p tcggcaCCTCCACca CGUGGAGG m7b Disrupted HPTA4_189_G1043.1_3301934
hsa-miR-3165 tcggcacATCCACCa AGGUGGAU m7b Created HPTA4_189_G1043.1_3301934
hsa-miR-3689d tcggCACCTCCacca GGGAGGUG m7b Disrupted HPTA4_189_G1043.1_3301934
hsa-miR-3691-5p tcggcaCATCCACca AGUGGAUG m7b Created HPTA4_189_G1043.1_3301934
hsa-miR-376c-5p tcggcacATCCACCa GGUGGAUA m7a Created HPTA4_189_G1043.1_3301934
hsa-miR-455-5p tcGGCACATccacca UAUGUGCC m7b (m6b->m7b) HPTA4_189_G1043.1_3301934

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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