SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000945
Gene Symbol: PPP3R1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.68179294C>T COSN14448827 8070199 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4539 taatGTTCAGactga GCUGAACU m6b Disrupted HHRBL_8212_BCBL1-2of3-SCL_1159
hsa-miR-543 tAATGTTTagactga AAACAUUC m7a Created HHRBL_8212_BCBL1-2of3-SCL_1159
hsa-miR-622 taatgttCAGACTGa ACAGUCUG m7b Disrupted HHRBL_8212_BCBL1-2of3-SCL_1159

Mutation Mutation ID Sample Name Cancer Type
chr2:g.68179157A>T COSN7992334 PCSI_0164_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548c-3p tttgtGATTTTTttg CAAAAAUC m7b Created HHRBL_8211_BCBL1-2of3-SCL_3086

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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