SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_206873
Gene Symbol: PPP1CA
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.67399616C>T COSM403646 LUAD-E01317 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-127-5p actGCTTCAactgcc CUGAAGCU m6b Disrupted HPTA2_335_G1021.1_67167096
hsa-miR-4422 acTGCTTTaactgcc AAAAGCAU m6b Created HPTA2_335_G1021.1_67167096
hsa-miR-7843-3p actGCTTCAactgcc AUGAAGCC m6b Disrupted HPTA2_335_G1021.1_67167096
hsa-miR-9-3p actGCTTTAactgcc AUAAAGCU m6b Created HPTA2_335_G1021.1_67167096
hsa-miR-127-5p actGCTTCAactgcc CUGAAGCU m6b Disrupted HPTA2_335_G1021.1_67167096
hsa-miR-4422 acTGCTTTaactgcc AAAAGCAU m6b Created HPTA2_335_G1021.1_67167096
hsa-miR-7843-3p actGCTTCAactgcc AUGAAGCC m6b Disrupted HPTA2_335_G1021.1_67167096
hsa-miR-9-3p actGCTTTAactgcc AUAAAGCU m6b Created HPTA2_335_G1021.1_67167096

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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