SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000938
Gene Symbol: POLR2B
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.56999658T>C COSM4799187 BCM337T [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4650-3p tggcaacTCTACCat AGGUAGAA m6b Disrupted HPSEF_16570_G19960.1_57865834
hsa-miR-6501-5p TGGCAACTctaccat AGUUGCCA m8a Disrupted HPSEF_16570_G19960.1_57865834
hsa-miR-4451 tggcaaCTCTACCAt UGGUAGAG m8a Disrupted HPSEF_16570_G19960.1_57865834
hsa-miR-3529-5p tggcaacTCTACCat AGGUAGAC m6b Disrupted HPSEF_16570_G19960.1_57865834
hsa-miR-296-3p tggCAACCCTaccat GAGGGUUG m7b Created HPSEF_16570_G19960.1_57865834
hsa-miR-219a-1-3p tggCAACTCTaccat AGAGUUGA m7a Disrupted HPSEF_16570_G19960.1_57865834

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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