SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0076721
Gene Symbol: PKHD1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.51947120G>A COSN1334361 HX14T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548a-3p aggagCAGTTTTGca CAAAACUG m8a Disrupted HHFKP_122887_cluster-19963_1_6
hsa-miR-548ar-3p aggagCAGTTTTgca UAAAACUG m7b Disrupted HHFKP_122887_cluster-19963_1_6
hsa-miR-548av-3p aggaGCAGTTTTgca AAAACUGC m8a Disrupted HHFKP_122887_cluster-19963_1_6
hsa-miR-548az-3p aggagCAGTTTTgca AAAAACUG m7b Disrupted HHFKP_122887_cluster-19963_1_6
hsa-miR-548e-3p aggagCAGTTTTgca AAAAACUG m7b Disrupted HHFKP_122887_cluster-19963_1_6
hsa-miR-548f-3p aggagCAGTTTTgca AAAAACUG m7b Disrupted HHFKP_122887_cluster-19963_1_6
hsa-miR-548o-3p aggagcAGTTTTGca CCAAAACU m7b Disrupted HHFKP_122887_cluster-19963_1_6
hsa-miR-6772-3p AGGAGCAAttttgca UUGCUCCU m8a Created HHFKP_122887_cluster-19963_1_6
hsa-miR-302f aggAGCAATTttgca UAAUUGCU m7b Created HHFKP_122887_cluster-19963_1_6
hsa-miR-1468-3p aggagcaATTTTGCa AGCAAAAU m7b Created HHFKP_122887_cluster-19963_1_6
hsa-miR-1323 aggagcAGTTTTGca UCAAAACU m7b Disrupted HHFKP_122887_cluster-19963_1_6

Mutation Mutation ID Sample Name Cancer Type
chr6:g.51917195G>A COSN7886384 8066081 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6845-3p gtgggggGGAGAGag CCUCUCCU m6b Disrupted HHRBL_12458_BCBL1-2of3-SCL_15695
hsa-miR-6867-3p gtggggGGGAGAGag CUCUCCCU m7a Disrupted HHRBL_12458_BCBL1-2of3-SCL_15695
hsa-miR-6873-3p gtgggggAGAGAGAg UUCUCUCU m7b Created HHRBL_12458_BCBL1-2of3-SCL_15695
hsa-miR-7110-3p gtggggGAGAGAGAg UCUCUCUC m8a Created HHRBL_12458_BCBL1-2of3-SCL_15695

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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