SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0076718
Gene Symbol: PKHD1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.51747948C>T COSM4153521 AOCS-139-19-0 [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-372-3p ccGCACTTagccaac AAAGUGCU m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-373-3p ccGCACTTagccaac GAAGUGCU m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-647 ccgcactCAGCCAac GUGGCUGC m6b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-8077 ccgcACTCAGCCaac GGCUGAGU m8a Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-372-3p ccGCACTTagccaac AAAGUGCU m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-373-3p ccGCACTTagccaac GAAGUGCU m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-647 ccgcactCAGCCAac GUGGCUGC m6b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-8077 ccgcACTCAGCCaac GGCUGAGU m8a Disrupted HPCB3_20411_G28071.1_51612737

Mutation Mutation ID Sample Name Cancer Type
chr6:g.51747948C>A COSM1137537 TCGA-CJ-5676-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4473 ccGCACTAagccaac CUAGUGCU m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-647 ccgcactCAGCCAac GUGGCUGC m6b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-8077 ccgcACTCAGCCaac GGCUGAGU m8a Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-4473 ccGCACTAagccaac CUAGUGCU m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-647 ccgcactCAGCCAac GUGGCUGC m6b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-8077 ccgcACTCAGCCaac GGCUGAGU m8a Disrupted HPCB3_20411_G28071.1_51612737

Mutation Mutation ID Sample Name Cancer Type
chr6:g.51747946G>A COSM389569 LUAD_E00565 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-380-5p gcacTCAACCAactt UGGUUGAC m7a Created HPCB3_20411_G28071.1_51612737
hsa-miR-4715-5p gcactcaGCCAACTt AAGUUGGC m7b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-563 gcacTCAACCaactt AGGUUGAC m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-647 gcactCAGCCAactt GUGGCUGC m6b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-8077 gcACTCAGCCaactt GGCUGAGU m8a Disrupted HPCB3_20411_G28071.1_51612737

Mutation Mutation ID Sample Name Cancer Type
chr6:g.51747945C>A COSM1150418 TCGA-18-3421-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1231 cactCAGACAacttg GUGUCUGG m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-382-5p cactcagACAACTTg GAAGUUGU m7b Created HPCB3_20411_G28071.1_51612737
hsa-miR-4715-5p cactcaGCCAACTTg AAGUUGGC m8a Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-632 cactCAGACAacttg GUGUCUGC m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-647 cactCAGCCAacttg GUGGCUGC m6b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-8077 cACTCAGCCaacttg GGCUGAGU m8a (m8a->m7a) HPCB3_20411_G28071.1_51612737
hsa-miR-1231 cactCAGACAacttg GUGUCUGG m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-382-5p cactcagACAACTTg GAAGUUGU m7b Created HPCB3_20411_G28071.1_51612737
hsa-miR-4715-5p cactcaGCCAACTTg AAGUUGGC m8a Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-632 cactCAGACAacttg GUGUCUGC m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-647 cactCAGCCAacttg GUGGCUGC m6b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-8077 cACTCAGCCaacttg GGCUGAGU m8a (m8a->m7a) HPCB3_20411_G28071.1_51612737

Mutation Mutation ID Sample Name Cancer Type
chr6:g.51747944C>A COSM378798 LUAD-RT-S01700 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4715-5p actcaGCCAACTTga AAGUUGGC m8a Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-628-5p acTCAGCAaacttga AUGCUGAC m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-647 actCAGCCAacttga GUGGCUGC m6b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-7160-5p aCTCAGCAaacttga UGCUGAGG m7a Created HPCB3_20411_G28071.1_51612737

Mutation Mutation ID Sample Name Cancer Type
chr6:g.51747928G>C COSM1546618 TCGA-75-6214-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-367-5p atCAACAGatagagc ACUGUUGC m6b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-511-3p atcaACACATagagc AAUGUGUA m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-653-5p aTCAACACatagagc GUGUUGAA m7a Created HPCB3_20411_G28071.1_51612737
hsa-miR-1267 aTCAACAGatagagc CCUGUUGA m7b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-367-5p atCAACAGatagagc ACUGUUGC m6b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-511-3p atcaACACATagagc AAUGUGUA m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-653-5p aTCAACACatagagc GUGUUGAA m7a Created HPCB3_20411_G28071.1_51612737

Mutation Mutation ID Sample Name Cancer Type
chr6:g.51747928G>A COSM1080156 TCGA-D1-A17Q-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1267 aTCAACAGatagagc CCUGUUGA m7b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-138-2-3p atcaacAAATAGagc GCUAUUUC m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-367-5p atCAACAGatagagc ACUGUUGC m6b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-1267 aTCAACAGatagagc CCUGUUGA m7b Disrupted HPCB3_20411_G28071.1_51612737
hsa-miR-138-2-3p atcaacAAATAGagc GCUAUUUC m6b Created HPCB3_20411_G28071.1_51612737
hsa-miR-367-5p atCAACAGatagagc ACUGUUGC m6b Disrupted HPCB3_20411_G28071.1_51612737

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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