SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_015157
Gene Symbol: PHLDB1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.118656780T>C COSM923640 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3913-3p atgGATGTCattgtc AGACAUCA m6b Disrupted HHKTA_28222_NM_015157|4430|4469|2.63934440415718|0.140311703361986
hsa-miR-4642 atgGATGCCATtgtc AUGGCAUC m8a Created HHKTA_28222_NM_015157|4430|4469|2.63934440415718|0.140311703361986
hsa-miR-489-3p atgGATGTCAttgtc GUGACAUC m7b Disrupted HHKTA_28222_NM_015157|4430|4469|2.63934440415718|0.140311703361986
hsa-miR-5197-5p atggaTGCCATTGtc CAAUGGCA m8a Created HHKTA_28222_NM_015157|4430|4469|2.63934440415718|0.140311703361986

Mutation Mutation ID Sample Name Cancer Type
chr11:g.118656765G>A COSM246569 PR-00-1165 [prostate][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5011-3p gCCATGCAtatctgg GUGCAUGG m7b Created HHKTA_28222_NM_015157|4430|4469|2.63934440415718|0.140311703361986

Mutation Mutation ID Sample Name Cancer Type
chr11:g.118653323C>T COSN49083
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4712-3p gaaaccCTCTCATTg AAUGAGAG m8a Created HHFCT_31109_cluster-3877_14_8
hsa-miR-193b-5p gAAACCCCctcattg CGGGGUUU m7b Disrupted HHFCT_31109_cluster-3877_14_8
hsa-miR-1914-3p gaaacCCCCTCattg GGAGGGGU m6b Disrupted HHFCT_31109_cluster-3877_14_8
hsa-miR-6738-5p gaaacCCCCTCattg CGAGGGGU m6b Disrupted HHFCT_31109_cluster-3877_14_8
hsa-miR-6734-5p gaaacCCCCTCAttg UUGAGGGG m7b Disrupted HHFCT_31109_cluster-3877_14_8
hsa-miR-6732-5p gaaACCCCCTcattg UAGGGGGU m7b Disrupted HHFCT_31109_cluster-3877_14_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser