SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0029948
Gene Symbol: PDS5B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.32699780C>T COSM1188692 LC_S19 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6818-5p atTCACACAggtgtt UUGUGUGA m7b (m7b->m6b) HHRBC_3682_BC3-2of3-SCL_9742

Mutation Mutation ID Sample Name Cancer Type
chr13:g.32699770G>A COSM121521 HN_00443 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-335-3p tcATGAAAAAattca UUUUUCAU m8a Created HHRBC_3682_BC3-2of3-SCL_9742
hsa-miR-6875-3p tcatGAAGAAattca AUUCUUCC m6b Disrupted HHRBC_3682_BC3-2of3-SCL_9742

Mutation Mutation ID Sample Name Cancer Type
chr13:g.32699767G>A COSM4529734 CSCC-16-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-433-3p attTCATGAagaaat AUCAUGAU m6b Disrupted HHRBC_3682_BC3-2of3-SCL_9742
hsa-miR-6875-3p atttcatGAAGAAat AUUCUUCC m6b Disrupted HHRBC_3682_BC3-2of3-SCL_9742
hsa-miR-7154-5p atTTCATGAAgaaat UUCAUGAA m8a Disrupted HHRBC_3682_BC3-2of3-SCL_9742
hsa-miR-8060 atTTCATGaagaaat CCAUGAAG m6b Disrupted HHRBC_3682_BC3-2of3-SCL_9742

Mutation Mutation ID Sample Name Cancer Type
chr13:g.32699744C>T COSM3468434 TCGA-EE-A2MS-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1911-3p acctgatCCTGGTaa CACCAGGC m6b Disrupted HHFCT_42160_cluster-5913_9_11
hsa-miR-665 acctgaTCCTGGTaa ACCAGGAG m7a Disrupted HHFCT_42160_cluster-5913_9_11
hsa-miR-6753-5p acctgatCCTGGTaa CACCAGGG m6b Disrupted HHFCT_42160_cluster-5913_9_11

Mutation Mutation ID Sample Name Cancer Type
chr13:g.32699739C>G COSM4713416 T3116 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4772-5p aatttaCCTGATCct UGAUCAGG m7b Disrupted HHFCT_42160_cluster-5913_9_11

Mutation Mutation ID Sample Name Cancer Type
chr13:g.32697793C>G COSN7398702 8044594 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4662a-3p aagCTATCTTgacct AAAGAUAG m7b Disrupted HHFKP_40777_cluster-5913_11_291
hsa-miR-505-3p aagctaTGTTGACct CGUCAACA m7b Created HHFKP_40777_cluster-5913_11_291

Mutation Mutation ID Sample Name Cancer Type
chr13:g.32675906G>T COSM946921 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-15b-3p gggcaaATGATTCag CGAAUCAU m7b Created HHFKP_40774_cluster-5913_8_16
hsa-miR-3121-5p ggGCAAAGGAttcag UCCUUUGC m8a Disrupted HHFKP_40774_cluster-5913_8_16
hsa-miR-500a-5p gggcaAAGGATTcag UAAUCCUU m7b Disrupted HHFKP_40774_cluster-5913_8_16
hsa-miR-501-5p gggcAAAGGATTcag AAUCCUUU m8a Disrupted HHFKP_40774_cluster-5913_8_16
hsa-miR-579-3p gggCAAATGAttcag UUCAUUUG m7b Created HHFKP_40774_cluster-5913_8_16
hsa-miR-664b-3p gggCAAATGAttcag UUCAUUUG m7b Created HHFKP_40774_cluster-5913_8_16

Mutation Mutation ID Sample Name Cancer Type
chr13:g.32675904A>G COSM220517 06-24915 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][diffuse_large_B_cell_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-18a-3p tgGGGCAGaggattc ACUGCCCU m6b Created HHFKP_40774_cluster-5913_8_16
hsa-miR-1913 tGGGGCAGAggattc UCUGCCCC m8a (m7a->m8a) HHFKP_40774_cluster-5913_8_16
hsa-miR-3121-5p tgggGCAAAGGAttc UCCUUUGC m8a Disrupted HHFKP_40774_cluster-5913_8_16
hsa-miR-324-3p tGGGGCAGaggattc ACUGCCCC m7b Created HHFKP_40774_cluster-5913_8_16
hsa-miR-500a-5p tggggcaAAGGATTc UAAUCCUU m7b Disrupted HHFKP_40774_cluster-5913_8_16
hsa-miR-501-5p tggggcAAAGGATTc AAUCCUUU m8a Disrupted HHFKP_40774_cluster-5913_8_16
hsa-miR-6780a-3p tggggCAGAGGAttc CUCCUCUG m7b Created HHFKP_40774_cluster-5913_8_16

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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