SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0070466
Gene Symbol: PDLIM5
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.94550831T>G COSN7645927 PCSI_0048_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1278 acaagCAGTACTAga UAGUACUG m8a Created HPSEF_16689_G20110.1_95471976
hsa-miR-155-5p acaAGCATTActaga UUAAUGCU m7b Disrupted HPSEF_16689_G20110.1_95471976
hsa-miR-628-3p acaagcaTTACTAGa UCUAGUAA m7b Disrupted HPSEF_16689_G20110.1_95471976

Mutation Mutation ID Sample Name Cancer Type
chr4:g.94534940T>G COSN10037911 C0029T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4286 catttgcGTGGGGat ACCCCACU m6b Created HPTA4_2968_G13534.1_95456081

Mutation Mutation ID Sample Name Cancer Type
chr4:g.94523787G>C COSM4835566 TCGA-Q1-A73O-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6884-3p cagcatTGATGGaat CCCAUCAC m6b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-8060 cagcaTTCATGGaat CCAUGAAG m7a Created HHFKP_110665_cluster-17248_11_18
hsa-miR-6884-3p cagcatTGATGGaat CCCAUCAC m6b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-8060 cagcaTTCATGGaat CCAUGAAG m7a Created HHFKP_110665_cluster-17248_11_18
hsa-miR-6884-3p cagcatTGATGGaat CCCAUCAC m6b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-8060 cagcaTTCATGGaat CCAUGAAG m7a Created HHFKP_110665_cluster-17248_11_18
hsa-miR-6884-3p cagcatTGATGGaat CCCAUCAC m6b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-8060 cagcaTTCATGGaat CCAUGAAG m7a Created HHFKP_110665_cluster-17248_11_18

Mutation Mutation ID Sample Name Cancer Type
chr4:g.94523778C>G COSM4826387 TCGA-C5-A1BK-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4251 tgtggTTCTCAGcat CCUGAGAA m7b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-4526 tgtggtTGTCAGCat GCUGACAG m7a Created HHFKP_110665_cluster-17248_11_18
hsa-miR-4663 tgtggttCTCAGCat AGCUGAGC m6b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-589-5p tgtGGTTCTCAgcat UGAGAACC m8a Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-628-5p tgtggttGTCAGCAt AUGCUGAC m7b Created HHFKP_110665_cluster-17248_11_18
hsa-miR-8077 tgtggttCTCAGCat GGCUGAGU m6b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-4251 tgtggTTCTCAGcat CCUGAGAA m7b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-4526 tgtggtTGTCAGCat GCUGACAG m7a Created HHFKP_110665_cluster-17248_11_18
hsa-miR-4663 tgtggttCTCAGCat AGCUGAGC m6b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-589-5p tgtGGTTCTCAgcat UGAGAACC m8a Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-628-5p tgtggttGTCAGCAt AUGCUGAC m7b Created HHFKP_110665_cluster-17248_11_18
hsa-miR-8077 tgtggttCTCAGCat GGCUGAGU m6b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-4251 tgtggTTCTCAGcat CCUGAGAA m7b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-4526 tgtggtTGTCAGCat GCUGACAG m7a Created HHFKP_110665_cluster-17248_11_18
hsa-miR-4663 tgtggttCTCAGCat AGCUGAGC m6b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-589-5p tgtGGTTCTCAgcat UGAGAACC m8a Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-628-5p tgtggttGTCAGCAt AUGCUGAC m7b Created HHFKP_110665_cluster-17248_11_18
hsa-miR-8077 tgtggttCTCAGCat GGCUGAGU m6b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-4251 tgtggTTCTCAGcat CCUGAGAA m7b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-4526 tgtggtTGTCAGCat GCUGACAG m7a Created HHFKP_110665_cluster-17248_11_18
hsa-miR-4663 tgtggttCTCAGCat AGCUGAGC m6b Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-589-5p tgtGGTTCTCAgcat UGAGAACC m8a Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-628-5p tgtggttGTCAGCAt AUGCUGAC m7b Created HHFKP_110665_cluster-17248_11_18
hsa-miR-8077 tgtggttCTCAGCat GGCUGAGU m6b Disrupted HHFKP_110665_cluster-17248_11_18

Mutation Mutation ID Sample Name Cancer Type
chr4:g.94523772G>A COSM1059061 TCGA-B5-A11E-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6785-3p aGGCGATGTggttct ACAUCGCC m8a (m8a->m7a) HHFKP_110665_cluster-17248_11_18
hsa-miR-6785-3p aGGCGATGTggttct ACAUCGCC m8a (m8a->m7a) HHFKP_110665_cluster-17248_11_18
hsa-miR-6785-3p aGGCGATGTggttct ACAUCGCC m8a (m8a->m7a) HHFKP_110665_cluster-17248_11_18

Mutation Mutation ID Sample Name Cancer Type
chr4:g.94523769G>T COSM1261835 TCGA-78-7154-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103b aataGGCTATGtggt UCAUAGCC m7b Created HHFKP_110665_cluster-17248_11_18
hsa-miR-6785-3p aataGGCGATGTggt ACAUCGCC m8a Disrupted HHFKP_110665_cluster-17248_11_18
hsa-miR-103b aataGGCTATGtggt UCAUAGCC m7b Created HHFKP_110665_cluster-17248_11_18
hsa-miR-6785-3p aataGGCGATGTggt ACAUCGCC m8a Disrupted HHFKP_110665_cluster-17248_11_18

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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