SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001040429
Gene Symbol: PCDH17

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr13:g.57702813T>C COSN7407856 8066467 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4504 gtctTTGTCACAttc UGUGACAA m8a Disrupted HHRBC_3789_BC3-2of3-SCL_10898
hsa-miR-891a-3p gtcttTGCCACattc AGUGGCAC m6b Created HHRBC_3789_BC3-2of3-SCL_10898
hsa-miR-8066 gtctttgTCACATTc CAAUGUGA m7b Disrupted HHRBC_3789_BC3-2of3-SCL_10898
hsa-miR-4501 gtctttGTCACATtc UAUGUGAC m7b Disrupted HHRBC_3789_BC3-2of3-SCL_10898
hsa-miR-3688-5p gtctTTGCCACattc AGUGGCAA m7b Created HHRBC_3789_BC3-2of3-SCL_10898

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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