SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001142769
Gene Symbol: PCDH15
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.54799806T>A COSN5287665 RK024_C [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-449b-3p cttaagtTGTGGCTa CAGCCACA m7b Disrupted HPRO8_2411_G3094.1_56559568
hsa-miR-449b-3p cttaagtTGTGGCTa CAGCCACA m7b Disrupted HPRO8_2411_G3094.1_56559568

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser