SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0054686
Gene Symbol: PAPOLG
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Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.60794004C>T COSM3582455 TCGA-EE-A17X-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1296-3p tcaccCCCCACTgtg GAGUGGGG m7b Disrupted HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-1914-3p tcACCCCTCactgtg GGAGGGGU m7b (m6b->m7b) HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-194-3p tcacccCCCACTGtg CCAGUGGG m7b Disrupted HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-4447 tcacCCCCCACtgtg GGUGGGGG m7b Disrupted HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-4472 tcacCCCCCACtgtg GGUGGGGG m7b Disrupted HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-5194 tcACCCCTCActgtg UGAGGGGU m8a Created HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-6734-5p tcaCCCCTCActgtg UUGAGGGG m7b Created HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-6738-5p tcACCCCTCactgtg CGAGGGGU m7b (m6b->m7b) HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-6752-5p tCACCCCCCactgtg GGGGGGUG m8a (m8a->m7a) HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-6782-5p tCACCCCTcactgtg UAGGGGUG m7b Created HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-6842-5p tCACCCCCcactgtg UGGGGGUG m7b Disrupted HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-6885-5p tcaCCCCCCactgtg AGGGGGGC m6b Disrupted HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-7109-5p tcaCCCCCCActgtg CUGGGGGG m7b Disrupted HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677
hsa-miR-7110-5p tCACCCCCcactgtg UGGGGGUG m7b Disrupted HHKTA_51410_NM_022894|2015|2054|1.29803823155271|0.15610507533677

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60791849C>T COSM4854534 TCGA-EK-A3GK-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-196a-5p accACTACCTtcctg UAGGUAGU m7b Disrupted HPCB1_21370_G26867.1_61018987
hsa-miR-196b-5p accACTACCTtcctg UAGGUAGU m7b Disrupted HPCB1_21370_G26867.1_61018987
hsa-miR-4460 ACCACTATcttcctg AUAGUGGU m8a Created HPCB1_21370_G26867.1_61018987
hsa-miR-4476 accactaCCTTCCTg CAGGAAGG m7b Disrupted HPCB1_21370_G26867.1_61018987
hsa-miR-4662a-3p accaCTATCTTcctg AAAGAUAG m7b Created HPCB1_21370_G26867.1_61018987
hsa-miR-6876-5p accactaCCTTCCTg CAGGAAGG m7b Disrupted HPCB1_21370_G26867.1_61018987

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60791829A>G COSM1565522 TCGA-CI-6621-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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