SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: hsa_circ_0054682
Gene Symbol: PAPOLG
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Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr2:g.60771528G>A COSM4756249 pfg088T [stomach][NS][carcinoma][intestinal_adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-28-3p tgATCTAGTctttgc CACUAGAU m7b (m7b->m6b) HHFKP_81678_cluster-12889_3_12
hsa-miR-548u tgatctAGTCTTTGc CAAAGACU m8a Disrupted HHFKP_81678_cluster-12889_3_12
hsa-miR-7161-5p tgatctAGTCTTTgc UAAAGACU m7b Disrupted HHFKP_81678_cluster-12889_3_12

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60771525C>G COSM72065 TCGA-04-1356-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-28-3p gattgATCTAGTctt CACUAGAU m7b Disrupted HHFKP_81678_cluster-12889_3_12
hsa-miR-499a-3p gatTGATGTagtctt AACAUCAC m6b Created HHFKP_81678_cluster-12889_3_12
hsa-miR-499b-3p gatTGATGTagtctt AACAUCAC m6b Created HHFKP_81678_cluster-12889_3_12
hsa-miR-5694 gatTGATCTagtctt CAGAUCAU m6b Disrupted HHFKP_81678_cluster-12889_3_12

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60768832AT>A COSM3053989 SW48 [large_intestine][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-548c-3p agatctGATTTTTttc CAAAAAUC m7b Disrupted HPRO6_42972_G50739.1_60995977

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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