SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: hsa_circ_0054681
Gene Symbol: PAPOLG
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.60760192A>T COSM575607 TCGA-05-4397-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3129-3p cccaATTAGTTTggc AAACUAAU m8a Disrupted HHFKP_81676_cluster-12889_1_127
hsa-miR-5583-5p cccaATTAGTTTggc AAACUAAU m8a Disrupted HHFKP_81676_cluster-12889_1_127
hsa-miR-7-1-3p cccaATTTGTTtggc CAACAAAU m7b Created HHFKP_81676_cluster-12889_1_127
hsa-miR-7-2-3p cccaATTTGTTtggc CAACAAAU m7b Created HHFKP_81676_cluster-12889_1_127

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60760179T>C COSM477534 TCGA-B0-5080-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-145-3p atGGAATCacctccc GGAUUCCU m6b Created HHFCT_88459_cluster-12889_3_15
hsa-miR-3689d atggaatCACCTCCc GGGAGGUG m7b Created HHFCT_88459_cluster-12889_3_15
hsa-miR-6851-5p atggaatCACCTCCc AGGAGGUG m7b Created HHFCT_88459_cluster-12889_3_15
hsa-miR-7854-3p atggaaTCACCTCcc UGAGGUGA m7b Created HHFCT_88459_cluster-12889_3_15
hsa-miR-145-3p atGGAATCacctccc GGAUUCCU m6b Created HHFKP_81676_cluster-12889_1_127
hsa-miR-3689d atggaatCACCTCCc GGGAGGUG m7b Created HHFKP_81676_cluster-12889_1_127
hsa-miR-6851-5p atggaatCACCTCCc AGGAGGUG m7b Created HHFKP_81676_cluster-12889_1_127
hsa-miR-7854-3p atggaaTCACCTCcc UGAGGUGA m7b Created HHFKP_81676_cluster-12889_1_127

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60760163A>C COSM4409369 SM-4AX85 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1251-3p cgtcaacCAAAGCat CGCUUUGC m6b Created HHFCT_88459_cluster-12889_3_15
hsa-miR-3140-3p cgtcaaCAAAAGCat AGCUUUUG m7b Disrupted HHFCT_88459_cluster-12889_3_15
hsa-miR-380-5p cGTCAACCAaagcat UGGUUGAC m8a (m7a->m8a) HHFCT_88459_cluster-12889_3_15
hsa-miR-563 cGTCAACCaaagcat AGGUUGAC m7b Created HHFCT_88459_cluster-12889_3_15
hsa-miR-659-3p cgtcAACCAAagcat CUUGGUUC m6b Created HHFCT_88459_cluster-12889_3_15
hsa-miR-9-5p cgtcaACCAAAGcat UCUUUGGU m7b Created HHFCT_88459_cluster-12889_3_15
hsa-miR-1251-3p cgtcaacCAAAGCat CGCUUUGC m6b Created HHFKP_81676_cluster-12889_1_127
hsa-miR-3140-3p cgtcaaCAAAAGCat AGCUUUUG m7b Disrupted HHFKP_81676_cluster-12889_1_127
hsa-miR-380-5p cGTCAACCAaagcat UGGUUGAC m8a (m7a->m8a) HHFKP_81676_cluster-12889_1_127
hsa-miR-563 cGTCAACCaaagcat AGGUUGAC m7b Created HHFKP_81676_cluster-12889_1_127
hsa-miR-659-3p cgtcAACCAAagcat CUUGGUUC m6b Created HHFKP_81676_cluster-12889_1_127
hsa-miR-9-5p cgtcaACCAAAGcat UCUUUGGU m7b Created HHFKP_81676_cluster-12889_1_127

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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