SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_022894
Gene Symbol: PAPOLG
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.60798275G>A COSN7078983 8066067 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4519 tttttaCACTGCTtt CAGCAGUG m7b Created HHKTA_23085_NM_022894|3532|3571|3.15855969677827|0.15610507533677
hsa-miR-503-5p tttttaCGCTGCTtt UAGCAGCG m7b Disrupted HHKTA_23085_NM_022894|3532|3571|3.15855969677827|0.15610507533677
hsa-miR-6499-3p tttttACACTGCTtt AGCAGUGU m8a Created HHKTA_23085_NM_022894|3532|3571|3.15855969677827|0.15610507533677
hsa-miR-4519 tttttaCACTGCTtt CAGCAGUG m7b Created HPCB1_21372_G26869.1_61025408
hsa-miR-503-5p tttttaCGCTGCTtt UAGCAGCG m7b Disrupted HPCB1_21372_G26869.1_61025408
hsa-miR-6499-3p tttttACACTGCTtt AGCAGUGU m8a Created HPCB1_21372_G26869.1_61025408
hsa-miR-4519 tttttaCACTGCTtt CAGCAGUG m7b Created HPCB3_12139_G16452.1_61025409
hsa-miR-503-5p tttttaCGCTGCTtt UAGCAGCG m7b Disrupted HPCB3_12139_G16452.1_61025409
hsa-miR-6499-3p tttttACACTGCTtt AGCAGUGU m8a Created HPCB3_12139_G16452.1_61025409
hsa-miR-4519 tttttaCACTGCTtt CAGCAGUG m7b Created HPKTA_33753_G36221.1_61025408
hsa-miR-503-5p tttttaCGCTGCTtt UAGCAGCG m7b Disrupted HPKTA_33753_G36221.1_61025408
hsa-miR-6499-3p tttttACACTGCTtt AGCAGUGU m8a Created HPKTA_33753_G36221.1_61025408
hsa-miR-4519 tttttaCACTGCTtt CAGCAGUG m7b Created HPTA3_10457_G16381.1_61025419
hsa-miR-503-5p tttttaCGCTGCTtt UAGCAGCG m7b Disrupted HPTA3_10457_G16381.1_61025419
hsa-miR-6499-3p tttttACACTGCTtt AGCAGUGU m8a Created HPTA3_10457_G16381.1_61025419
hsa-miR-4519 tttttaCACTGCTtt CAGCAGUG m7b Created HPTK1_16454_G19494.1_61025408
hsa-miR-503-5p tttttaCGCTGCTtt UAGCAGCG m7b Disrupted HPTK1_16454_G19494.1_61025408
hsa-miR-6499-3p tttttACACTGCTtt AGCAGUGU m8a Created HPTK1_16454_G19494.1_61025408

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60797505C>A COSN7078982 8016470 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1252-3p tgaaCTCATTTtttg CAAAUGAG m7b Created HPRO6_42975_G50742.1_61024624
hsa-miR-3662 tgaacTCATTTTttg GAAAAUGA m7b Created HPRO6_42975_G50742.1_61024624

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60797140C>T COSM176857 TCGA-AG-A002-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4694-3p tTCCATTTGactgac CAAAUGGA m8a (m7a->m8a) HHKTA_48217_NM_022894|2383|2422|1.42784205470798|0.15610507533677

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60797119C>T COSM329008 P53 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-105-3p caACATCCGTgtcat ACGGAUGU m8a Disrupted HHKTA_48217_NM_022894|2383|2422|1.42784205470798|0.15610507533677
hsa-miR-4462 caacatCCGTGTCAt UGACACGG m8a Disrupted HHKTA_48217_NM_022894|2383|2422|1.42784205470798|0.15610507533677
hsa-miR-5683 caaCATCTGTgtcat UACAGAUG m7b Created HHKTA_48217_NM_022894|2383|2422|1.42784205470798|0.15610507533677
hsa-miR-602 caacatCCGTGTCat GACACGGG m7a Disrupted HHKTA_48217_NM_022894|2383|2422|1.42784205470798|0.15610507533677
hsa-miR-642a-3p caacatcTGTGTCat AGACACAU m6b Created HHKTA_48217_NM_022894|2383|2422|1.42784205470798|0.15610507533677
hsa-miR-642b-3p caacatcTGTGTCat AGACACAU m6b Created HHKTA_48217_NM_022894|2383|2422|1.42784205470798|0.15610507533677

Mutation Mutation ID Sample Name Cancer Type
chr2:g.60795012C>T COSM4095007 TCGA-BR-4280-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3680-3p tacatcATGCAAAAa UUUUGCAU m8a Created HPRO6_42974_G50741.1_61022138
hsa-miR-450a-5p tacatcaCGCAAAAa UUUUGCGA m7a Disrupted HPRO6_42974_G50741.1_61022138
hsa-miR-450b-5p tacatcaTGCAAAAa UUUUGCAA m7a Created HPRO6_42974_G50741.1_61022138
hsa-miR-4666b tacatCATGCAAaaa UUGCAUGU m7a Created HPRO6_42974_G50741.1_61022138
hsa-miR-5011-3p tacatCATGCAaaaa GUGCAUGG m6b Created HPRO6_42974_G50741.1_61022138
hsa-miR-507 tacatcaTGCAAAAa UUUUGCAC m7a Created HPRO6_42974_G50741.1_61022138
hsa-miR-557 tacatcaTGCAAAaa GUUUGCAC m6b Created HPRO6_42974_G50741.1_61022138
hsa-miR-6076 tacaTCATGCaaaaa AGCAUGAC m6b Created HPRO6_42974_G50741.1_61022138
hsa-miR-6797-3p tacaTCATGCAaaaa UGCAUGAC m7a Created HPRO6_42974_G50741.1_61022138
hsa-miR-6821-5p tacatCACGCAaaaa GUGCGUGG m6b Disrupted HPRO6_42974_G50741.1_61022138

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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