SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001040284
Gene Symbol: PAPD5

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.50231586C>T COSN9647452 C0017T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-3p gataaTTCTGATtcc CAUCAGAA m7b Disrupted HHHNE_13117_PAPD5|NM_001040284|exon_utr3|-5.98123673467552|1.84393180030466

Mutation Mutation ID Sample Name Cancer Type
chr16:g.50231585T>C COSN9647451 C0017T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2115-3p agataaTTCTGATtc CAUCAGAA m7b Disrupted HHHNE_13117_PAPD5|NM_001040284|exon_utr3|-5.98123673467552|1.84393180030466
hsa-miR-3159 agaTAATCCTgattc UAGGAUUA m7b Created HHHNE_13117_PAPD5|NM_001040284|exon_utr3|-5.98123673467552|1.84393180030466

Mutation Mutation ID Sample Name Cancer Type
chr16:g.50224722G>A COSM971235 TCGA-AX-A0J1-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6806-5p TGCCTACAttgtttt UGUAGGCA m8a Created HHHNE_13112_PAPD5|NM_001040284|exon_CDS|-6.39598982163195|1.01442562639182
hsa-miR-6806-5p TGCCTACAttgtttt UGUAGGCA m8a Created HHHNE_13112_PAPD5|NM_001040284|exon_CDS|-6.39598982163195|1.01442562639182

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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