SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_000919
Gene Symbol: PAM

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.103029337G>T COSN8491641 3844_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-141-5p aatGGAAGATttgcc CAUCUUCC m7b Disrupted HHKTA_46164_NM_000919|3536|3575|1.55764587786326|0.677745227513354
hsa-miR-4762-5p aatggaAGATTTGcc CCAAAUCU m7b Disrupted HHKTA_46164_NM_000919|3536|3575|1.55764587786326|0.677745227513354

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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