SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001001923
Gene Symbol: OR5C1
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.122788981C>T COSM2150614 TCGA-06-0188-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5196-3p agGAGGATGAattca UCAUCCUC m8a Created HPRT3_26368_G35253.1_125551248
hsa-miR-4793-5p aggAGGATGaattca ACAUCCUG m6b Created HPRT3_26368_G35253.1_125551248
hsa-miR-4760-3p aggaggATGAATTca AAAUUCAU m7b Created HPRT3_26368_G35253.1_125551248

Mutation Mutation ID Sample Name Cancer Type
chr9:g.122788962C>T COSM1104896 TCGA-D1-A15X-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3648 gggcaaCCGCGGCcc AGCCGCGG m7b Disrupted HPRT3_26368_G35253.1_125551248
hsa-miR-579-5p gggcAACCGCGgccc UCGCGGUU m7b Disrupted HPRT3_26368_G35253.1_125551248

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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