SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_002547
Gene Symbol: OPHN1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.68336464C>A COSN1391720 HX12T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4782-3p GACAATCAtcctacc UGAUUGUC m8a Created HHFCT_165186_cluster-24347_17_8
hsa-miR-4695-5p gacaatCCTCCTacc CAGGAGGC m6b Disrupted HHFCT_165186_cluster-24347_17_8
hsa-miR-6766-3p GACAATCAtcctacc UGAUUGUC m8a Created HHFCT_165186_cluster-24347_17_8
hsa-miR-6894-5p gacaATCCTCCTacc AGGAGGAU m8a Disrupted HHFCT_165186_cluster-24347_17_8
hsa-miR-7154-3p gacaaTCCTCCTacc AGGAGGAC m7a Disrupted HHFCT_165186_cluster-24347_17_8
hsa-miR-766-5p gacaaTCCTCCTacc AGGAGGAA m7a Disrupted HHFCT_165186_cluster-24347_17_8
hsa-miR-1255a gacaaTCATCCTacc AGGAUGAG m7a Created HHFCT_165186_cluster-24347_17_8
hsa-miR-1265 gacaatCATCCTacc CAGGAUGU m6b Created HHFCT_165186_cluster-24347_17_8
hsa-miR-219a-5p GACAATCAtcctacc UGAUUGUC m8a Created HHFCT_165186_cluster-24347_17_8
hsa-miR-4266 gacaatCCTCCTAcc CUAGGAGG m7b Disrupted HHFCT_165186_cluster-24347_17_8

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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