SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001012393
Gene Symbol: OPCML

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.132783897A>C COSN8940928 SS6003149 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219a-5p ttttaaACAATCAat UGAUUGUC m7a Created HPCB1_7375_G9300.1_132653794
hsa-miR-4445-5p ttttaAACAATCaat AGAUUGUU m7b Created HPCB1_7375_G9300.1_132653794
hsa-miR-4782-3p ttttaaACAATCAat UGAUUGUC m7a Created HPCB1_7375_G9300.1_132653794
hsa-miR-508-3p ttttaaACAATCAat UGAUUGUA m7a Created HPCB1_7375_G9300.1_132653794
hsa-miR-6766-3p ttttaaACAATCAat UGAUUGUC m7a Created HPCB1_7375_G9300.1_132653794

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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