SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001278210
Gene Symbol: NUP153
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.17706392C>A COSN8513774 1953_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-25-5p ggaggCTCCGCCatg AGGCGGAG m7b Disrupted HHHNA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-4730 ggaggcTCCGCCAtg CUGGCGGA m7b Disrupted HHHNA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-658 ggaggCTCCGCCatg GGCGGAGG m7a Disrupted HHHNA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-6823-3p gGAGGCTCcgccatg UGAGCCUC m7b Disrupted HHHNA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-2114-3p gGAGGCTCcgccatg CGAGCCUC m7b Disrupted HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-25-5p ggaggCTCCGCCatg AGGCGGAG m7b Disrupted HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-4730 ggaggcTCCGCCAtg CUGGCGGA m7b Disrupted HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-658 ggaggCTCCGCCatg GGCGGAGG m7a Disrupted HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-6823-3p gGAGGCTCcgccatg UGAGCCUC m7b Disrupted HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155

Mutation Mutation ID Sample Name Cancer Type
chr6:g.17706377G>A COSM4867221 TCGA-AX-A0J0-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4740-3p gcCTCGGGagccgga GCCCGAGA m6b Disrupted HHHNA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-4740-3p gcCTCGGGagccgga GCCCGAGA m6b Disrupted HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-4740-3p gcCTCGGGagccgga GCCCGAGA m6b Disrupted HHHNA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-4740-3p gcCTCGGGagccgga GCCCGAGA m6b Disrupted HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155

Mutation Mutation ID Sample Name Cancer Type
chr6:g.17706357G>T COSM4923341 TCGA-CC-A7IH-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4313 cggAGGGGGCggtgg AGCCCCCU m7b Disrupted HHHNA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-6865-3p cgGAGGGTGcggtgg ACACCCUC m7b (m6b->m7b) HHHNA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-6887-3p cGGAGGGGgcggtgg UCCCCUCC m7b Disrupted HHHNA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-4313 cggAGGGGGCggtgg AGCCCCCU m7b Disrupted HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-6865-3p cgGAGGGTGcggtgg ACACCCUC m7b (m6b->m7b) HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-6887-3p cGGAGGGGgcggtgg UCCCCUCC m7b Disrupted HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-4313 cggAGGGGGCggtgg AGCCCCCU m7b Disrupted HHHNA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-6865-3p cgGAGGGTGcggtgg ACACCCUC m7b (m6b->m7b) HHHNA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-6887-3p cGGAGGGGgcggtgg UCCCCUCC m7b Disrupted HHHNA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-4313 cggAGGGGGCggtgg AGCCCCCU m7b Disrupted HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-6865-3p cgGAGGGTGcggtgg ACACCCUC m7b (m6b->m7b) HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155
hsa-miR-6887-3p cGGAGGGGgcggtgg UCCCCUCC m7b Disrupted HHHSA_18716_NUP153|NM_005124|exon_utr5|-6.96842717543604|0.959478907911155

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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