SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001134231
Gene Symbol: NT5DC2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.52524489A>G COSM1217968 587224 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4715-3p cttGGTGGCAtggcc GUGCCACC m7b Created HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128
hsa-miR-6872-3p cttggtGGCATGGcc CCCAUGCC m7b Created HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128

Mutation Mutation ID Sample Name Cancer Type
chr3:g.52524475C>T COSM1259616 ESO-708 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4291 ccacatCTGCTGAgg UUCAGCAG m7b Created HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128
hsa-miR-214-3p ccacatCTGCTGagg ACAGCAGG m6b Created HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128
hsa-miR-4764-5p cCACATCCgctgagg UGGAUGUG m7b Disrupted HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128
hsa-miR-761 ccacatCTGCTGagg GCAGCAGG m6b Created HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128
hsa-miR-7846-3p ccacaTCCGCTGagg CAGCGGAG m7a Disrupted HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128
hsa-miR-922 ccacaTCTGCTGagg GCAGCAGA m7b Created HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128
hsa-miR-105-3p ccACATCCGctgagg ACGGAUGU m7b (m7b->m6b) HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128

Mutation Mutation ID Sample Name Cancer Type
chr3:g.52524471G>A COSM1309350 TCGA-G2-A2EO-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-938 atccgcTAAGGGCAc UGCCCUUA m8a Created HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128
hsa-miR-7846-3p aTCCGCTGagggcac CAGCGGAG m7a Disrupted HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128
hsa-miR-938 atccgcTAAGGGCAc UGCCCUUA m8a Created HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128
hsa-miR-7846-3p aTCCGCTGagggcac CAGCGGAG m7a Disrupted HHKTB_3202_NM_022908|1966|2005|33.1507280728653|5.545318000128

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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